◆ 膜貫通タンパク質データ集（Jmol版） ◆
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※Jmolコンテンツリスト
《 初期表示は2at9 》
※本データ集は，SCOP (Structural Classification of Proteins)のClass: Membrane and cell surface proteins and peptidesに収録されているデータの中から，SOSUI WWW Server（PSBとSOSUIを利用した演習参照）で膜貫通領域をもつと推定されるデータを抽出して掲載し，その膜貫通部分（主としてα-helix構造）を選択して表示の変更ができるようにしたものです。h1～で各領域を，h_allで全領域を選択して右下フレームのボタンで各種表示の指定をすることが可能です。一部のデータでt1～およびt_allとあるのはTMHMMで求めた予測貫通部分です。
なお，膜貫通タンパク質には，細胞膜に存在する受容体やイオンチャネルなど，膜貫通部分がα-helix構造を持つもののほかに，β-sheetで形成されるβバレル構造を有するタンパク質（PDB部分データリストの1qd5，1t16_Aなど）等もありますが，SOSUIではβ-sheet領域を検出できないので，ここでは省略します。詳細は成書（例えば，「細胞の分子生物学 第4版」，pp.593-614）やWeb情報（例えば，Membrane Proteins of Known Structureなど）を参照してください。
1ap9 〈PDB〉 h1 h2 h3 h4 h5 h6 h7 h_all [Photoreceptor]X-Ray Structure Of Bacteriorhodopsin From Microcrystals Grown In Lipidic Cubic Phases.
1ar1のChain A 〈PDB〉 h1 h2 h3 h4 h5 h6 h7 h8 h9 h10 h11 h12 h_all [Complex (Oxidoreductase/Antibody)]Structure At 2.7 Angstrom Resolution Of The Paracoccus Denitrificans Two-Subunit Cytochrome C Oxidase Complexed With An Antibody Fv Fragment.
1at9 〈PDB〉 h1 h2 h3 h4 h5 h6 h7 h_all [Photoreceptor]Structure Of Bacteriorhodopsin At 3.0 Angstrom Determined By Electron Crystallography.
2at9 〈PDB〉 h1 h2 h3 h4 h5 h6 h7 h_all [Photoreceptor]Structure Of Bacteriorhodopsin At 3.0 Angstrom By Electron Crystallography.
1bm1 〈PDB〉 h1 h2 h3 h4 h5 h6 h7 h_all [Photoreceptor]Crystal Structure Of Bacteriorhodopsin In The Light-Adapted State.
1brd 〈PDB〉 h1 h2 h3 h4 h5 h6 h7 h_all [Photoreceptor]Model for the structure of bacteriorhodopsin based on high-resolution electron cryo-microscopy.
2brd 〈PDB〉 h1 h2 h3 h4 h5 h6 h7 h_all [Photoreceptor]Crystal Structure Of Bacteriorhodopsin In Purple Membrane.
1brrのChain A 〈PDB〉 h1 h2 h3 h4 h5 h6 h7 h_all [Proton Transport]X-Ray Structure Of The Bacteriorhodopsin Trimer/Lipid Complex.
1brx 〈PDB〉 h1 h2 h3 h4 h5 h6 h7 h_all [Proton Pump]Bacteriorhodopsin/Lipid Complex.
1c3w 〈PDB〉 h1 h2 h3 h4 h5 h6 h7 h_all [Ion Transport]Bacteriorhodopsin/Lipid Complex At 1.55 A Resolution.
1c8r 〈PDB〉 h1 h2 h3 h4 h5 h6 h7 h_all [Ion Transport]Bacteriorhodopsin D96M Br State At 2.0 A Resolution.
1c8s 〈PDB〉 h1 h2 h3 h4 h5 h6 h_all [Ion Transport]Bacteriorhodopsin D96N Late M State Intermediate.
1cwqのChain A 〈PDB〉 h1 h2 h3 h4 h5 h6 h7 h_all [Ion Transport]M Intermediate Structure Of The Wild Type Bacteriorhodopsin In Combination With The Ground State Structure.
1dze* 〈PDB〉h1 h2 h3 h4 h5 h6 h7 h_all [Bacteriorhodopsin]Structure Of The M Intermediate Of Bacteriorhodopsin Trapped At 100K.
1e0pのChain A（基底状態）* 〈資料，PDB〉 h1 h2 h3 h4 h5 h6 h7 h_all [Photoreceptor] ※関連参考情報L Intermediate Of Bacteriorhodopsin.
1e12 〈PDB〉 h1 h2 h3 h4 h5 h6 h7 h_all [Ion Pump]Halorhodopsin, A Light-Driven Chloride Pump.
1ehkのChain A 〈PDB〉 h1 h2 h3 h4 h5 h6 h7 h8 h9 h10 h11 h12 h13 h_all [Oxidoreductase]Crystal Structure Of The Aberrant Ba3-Cytochrome-C Oxidase From Thermus Thermophilus.
1eul 〈PDB〉 h1 h2 h3 h4 h5 h6 h7 h8 h9 h_all [Hydrolase | Caポンプ]Crystal Structure Of Calcium ATPase With Two Bound Calcium Ions.
1f4z 〈PDB〉 h1 h2 h3 h4 h5 h6 h7 h_all [Proton Transport, Membrane Protein]Bacteriorhodopsin-M Photointermediate State Of The E204Q Mutant At 1.8 Angstrom Resolution.
1f50 〈PDB〉 h1 h2 h3 h4 h5 h6 h7 h_all [Proton Transport, Membrane Protein]Bacteriorhodopsin-Br State Of The E204Q Mutant At 1.7 Angstrom Resolution.
1f88のChain A 〈資料，PDB〉h1 h2 h3 h4 h5 h6 h7 h_all ｜ t1 t2 t3 t4 t5 t6 t7 t_all [Signaling Protein]Crystal Structure Of Bovine Rhodopsin.
1fbb 〈PDB〉 h1 h2 h3 h4 h5 h6 h7 h_all [Proton Transport]Crystal Structure Of Native Conformation Of Bacteriorhodopsin.
1fbk 〈PDB〉 h1 h2 h3 h4 h5 h6 h7 h_all [Proton Transport]Crystal Structure Of Cytoplasmically Open Conformation Of Bacteriorhodopsin.
1fftのChain A 〈PDB〉 h2（h1なし） h3 h4 h5 h6 h7 h8 h9 h10 h11 h12 h13（h14-15なし） h_all（h2-13） [Oxidoreductase]The Structure Of Ubiquinol Oxidase From Escherichia Coli.
1fqy 〈PDB〉 h1 h2 h3 h4 h5 h_all [Membrane Protein | 2003年ノーベル化学賞 | アクアポリン]Structure Of Aquaporin-1 At 3.8 Å Resolution By Electron Crystallography.
1fx8 〈PDB〉 h1 h2 h3 h4 h5 h6 h_all [Membrane Protein]Crystal Structure Of The E. Coli Glycerol Facilitator (Glpf) With Substrate Glycerol.
1gu8 〈PDB〉 h1 h2 h3 h4 h5 h6 h7 h_all [Photoreceptor]
1gue 〈PDB〉 h1 h2 h3 h4 h5 h6 h7 h_all [Photoreceptor]
1h2sのChain A 〈PDB〉 h1 h2 h3 h4 h5 h6 h7 h_all [Menbrane Protein Complex]Molecular Basis Of Transmenbrane Signalling By Sensory Rhodopsin Ⅱ-Transducer Complex.
1h68 〈PDB〉 h1 h2 h3 h4 h5 h6 h7 h_all [Photoreceptor]
1h6i 〈PDB〉 h1 h2 h3 h4 h5 h_all [Membrane Protein]A Refined Structure Of Human Aquaporin 1.
1hzxのChain A〈PDB〉 h1 h2 h3 h4 h5 h6 h7 h_all [Signaling Protein]Crystal Structure Of Bovine Rhodopsin.
1ih5 〈PDB〉 h1 h2 h3 h4 h5 h_all [Membrane Protein]Crystal Structure Of Aquaporin-1.
1iw6 〈PDB〉 h1 h2 h3 h4 h5 h6 h7 h_all [Proton Transport]Crystal Structure Of The Ground State Of Bacteriorhodopsin.
1iwoのChain A 〈PDB，eProtS〉h1 h2 h3 h4 h5 h6 h7 h8 h9 h_all [Hydrolase | カルシウムATPアーゼ]Crystal Structure Of The Sr Ca2+-ATPase In The Absence Of Ca2+.
1ixf 〈PDB〉 h1 h2 h3 h4 h5 h6 h7 h_all [Proton Transport]Crystal Structure Of The K Intermediate Of Bacteriorhodopsin.
1j4n*（チャネル内） 〈PDB〉h1 h2 h3 h4 h5 h_all ｜ t1 t2 t3 t4 t5 t6 t_all [Membrane Protein | アクアポリン]Crystal Structure Of The Aqp1 Water Channel.
1jb0のChain A 〈PDB〉 h1 h2 h3 h4 h5 h6 h7 h_all [Photosynthesis]Crystal Structure Of Photosystem I: A Photosynthetic Reaction Center and Core Antenna System From Cyanobacteria.
 ※1jb0の全体構造
1jfp 〈PDB〉h1 h2 h3 h4 h5 h6 h7 h_all [Signaling Protein, Membrane Protein]Structure Of Bovine Rhodopsin (Dark Adapted).
1jgj* 〈資料，PDB〉 h1 h2 h3 h4 h5 h6 h7 h_all [Signaling Protein]Crystal Structure Of Sensory Rhodopsin Ⅱ At 2.4 Angstroms: Insights Into Color Tuning and Transducer Interaction.
1jv6 〈PDB〉 h1 h2 h3 h4 h5 h6 h7 h_all [Ion Transport]Bacteriorhodopsin D85S/F219L Double Mutant At 2.00 Angstrom Resolution.
1jv7 〈PDB〉 h1 h2 h3 h4 h5 h6 h7 h_all [Ion Transport]Bacteriorhodopsin O-Like Intermediate State Of The D85S Mutant At 2.25 Angstrom Resolution.
1kg8 〈PDB〉 h1 h2 h3 h4 h5 h6 h7 h_all [Proton Transport]X-Ray Structure Of An Early-M Intermediate Of Bacteriorhodopsin.
1kg9 〈PDB〉 h1 h2 h3 h4 h5 h6 h7 h_all [Proton Transport]Structure Of A "Mock-Trapped" Early-M Intermediate Of Bacteriorhosopsin.
1kgb 〈PDB〉 h1 h2 h3 h4 h5 h6 h7 h_all [Lyase (Aldehyde) Proton Transport]Structure Of Ground-State Bacteriorhodopsin.
1kju 〈PDB〉 h1 h2 h3 h4 h5 h6 h7 h8 h9 h_all [Hydrolase]Ca2+-ATPase In The E2 State.
1kmeのChain A 〈PDB〉 h1 h2 h3 h4 h5 h6 h7 h_all [Membrane Protein]Crystal Structure Of Bacteriorhodopsin Crystallized From Bicelles.
1kpkのChain A 〈PDB〉 h1 h2 h3 h4 h5 h6 h7 h8 h9 h10 h_all [Membrane Protein]Crystal Structure Of The Clc Chloride Channel From E. Coli.
1kplのChain A 〈PDB〉 h1 h2 h3 h4 h5 h6 h7 h8 h9 h10 h_all [Membrane Protein]Crystal Structure Of The Clc Chloride Channel From S. Typhimurium.
1l0m 〈PDB〉 h1 h2 h3 h4 h5 h6 h_all [Proton Transport]Solution Structure Of Bacteriorhodopsin.
1l7vのChain A 〈PDB〉 h1 h2 h3 h4 h5 h6 h7 h8 h_all [Transport Protein/Hydrolase]Bacterial Abc Transporter Involved In B12 Uptake.
1l9hのChain A 〈PDB〉 h1 h2 h3 h4 h5 h6 h7 h_all [Signaling Protein]Crystal Structure Of Bovine Rhodopsin At 2.6 Angstroms Resolution.
1lda 〈PDB〉 h1 h2 h3 h4 h5 h6 h_all [Transport Protein]Crystal Structure Of The E. Coli Glycerol Facilitator (Glpf) Without Substrate Glycerol.
1ldf 〈PDB〉 h1 h2 h3 h4 h5 h6 h_all [Transport Protein]Crystal Structure Of The E. Coli Glycerol Facilitator (Glpf) Mutation W48F, F200T.
1ldi 〈PDB〉 h1 h2 h3 h4 h5 h6 h_all [Transport Protein]Crystal Structure Of The E. Coli Glycerol Facilitator (Glpf) Without Substrate Glycerol.
1ln6 〈PDB〉 h1 h2 h3 h4 h5 h6 h7 h_all [Membrane Protein]Structure Of Bovine Rhodopsin (Metarhodopsin Ⅱ).
1m0k 〈PDB〉 h1 h2 h3 h4 h5 h6 h7 h_all [Ion Transport]Bacteriorhodopsin K Intermediate At 1.43 A Resolution.
1m0l 〈PDB〉 h1 h2 h3 h4 h5 h6 h7 h_all [Ion Transport]Bacteriorhodopsin/Lipid Complex At 1.47 A Resolution.
1m0m 〈PDB〉 h1 h2 h3 h4 h5 h6 h7 h_all [Ion Transport]Bacteriorhodopsin M1 Intermediate At 1.43 A Resolution.
1m56のChain A 〈PDB〉 h1 h2 h3 h4 h5 h6 h7 h8 h9 h10 h11 h12 h_all [Oxidoreductase]Structure Of Cytochrome C Oxidase From Rhodobactor Sphaeroides (Wild Type).
1m57のChain A 〈PDB〉 h1 h2 h3 h4 h5 h6 h7 h8 h9 h10 h11 h12 h_all [Oxidoreductase]Structure Of Cytochrome C Oxidase From Rhodobacter Sphaeroides (Eq(I-286) Mutant)).
1mgy 〈PDB〉 h1 h2 h3 h4 h5 h6 h7 h_all [Proton Transport]Structure Of The D85S Mutant Of Bacteriorhodopsin With Bromide Bound.
1o0a 〈PDB〉 h1 h2 h3 h4 h5 h6 h7 h_all [Proton Transport]Bacteriorhodopsin L Intermediate At 1.62 A Resolution.
1occのChain A 〈PDB〉 h1 h2 h3 h4 h5 h6 h7 h8 h9 h10 h11 h12 h_all [Oxidoreductase (Cytochrome(C)-Oxygen)]Structure Of Bovine Heart Cytochrome C Oxidase At The Fully Oxidized State.
2occのChain A 〈PDB〉 h1 h2 h3 h4 h5 h6 h7 h8 h9 h10 h11 h12 h_all [Oxidoreductase]Bovine Heart Cytochrome C Oxidase At The Fully Oxidized State.
1ocoのChain A 〈PDB〉 h1 h2 h3 h4 h5 h6 h7 h8 h9 h10 h11 h12 h_all [Oxidoreductase]Bovine Heart Cytochrome C Oxidase In Carbon Monoxide-Bound State.
1ocrのChain A 〈PDB〉 h1 h2 h3 h4 h5 h6 h7 h8 h9 h10 h11 h12 h_all [Oxidoreductase]Bovine Heart Cytochrome C Oxidase In The Fully Reduced State.
1oczのChain A 〈PDB〉 h1 h2 h3 h4 h5 h6 h7 h8 h9 h10 h11 h12 h_all [Oxidoreductase]Bovine Heart Cytochrome C Oxidase In Azide-Bound State.
1otsのChain A 〈PDB〉 h1 h2 h3 h4 h5 h6 h7 h8 h9 h10 h_all [Membrane Protein]Structure Of The Escherichia Coli Clc Chloride Channel and Fab Complex.
1ottのChain A 〈PDB〉 h1 h2 h3 h4 h5 h6 h7 h8 h9 h10 h_all [Membrane Protein]Structure Of The Escherichia Coli Clc Chloride Channel E148A Mutant and Fab Complex.
1otuのChain A 〈PDB〉 h1 h2 h3 h4 h5 h6 h7 h8 h9 h10 h_all [Membrane Protein]Structure Of The Escherichia Coli Clc Chloride Channel E148Q Mutant and Fab Complex.
1oy8 〈PDB〉 h1 h2 h3 h4 h5 h6 h7 h8 h9 h10 h11 h_all [Membrane Protein]Structural Basis Of Multiple Drug Binding Capacity Of The Acrb Multidrug Efflux Pump.
1oy9 〈PDB〉 h1 h2 h3 h4 h5 h6 h7 h8 h9 h10 h11 h_all [Membrane Protein]Structural Basis Of Multiple Drug Binding Capacity Of The Acrb Multidrug Efflux Pump.
1oyd 〈PDB〉 h1 h2 h3 h4 h5 h6 h7 h8 h9 h10 h11 h_all [Membrane Protein]Structural Basis Of Multiple Binding Capacity Of The Acrb Multidrug Efflux Pump.
1oye 〈PDB〉 h1 h2 h3 h4 h5 h6 h7 h8 h9 h10 h11 h_all [Membrane Protein]Structural Basis Of Multiple Binding Capacity Of The Acrb Multidrug Efflux Pump.
1p8h 〈PDB〉 h1 h2 h3 h4 h5 h6 h7 h_all [Proton Transport]Bacteriorhodopsin M1 Intermediate Produced At Room Temperature.
1p8i 〈PDB〉 h1 h2 h3 h4 h5 h6 h7 h_all [Proton Transport]F219L Bacteriorhodopsin Mutant.
1p8u 〈PDB〉 h1 h2 h3 h4 h5 h6 h7 h_all [Proton Transport]Bacteriorhodopsin N' Intermediate At 1.62 A Resolution.
1pf4のChain A・B 〈PDB〉 h1 h2 h3 h4 h5 h6 h_all [Lipid Transport]Structure Of Msba From Vibrio Cholera: A Multidrug Resistance Abc Transporter Homolog In A Closed Conformation.
1qhj 〈PDB〉 h1 h2 h3 h4 h5 h6 h7 h_all [Photoreceptor]X-Ray Structure Of Bacteriorhodopsin Grown In Lipidic Cubic Phases.
1qko 〈PDB〉 h1 h2 h3 h4 h5 h6 h7 h_all [Photoreceptor]High Resolution X-Ray Structure Of An Early Intermediate In The Bacteriorhodopsin Photocycle.
1qkp 〈PDB〉 h1 h2 h3 h4 h5 h6 h7 h_all [Photoreceptor]High Resolution X-Ray Structure Of An Early Intermediate In The Bacteriorhodopsin Photocycle.
1qleのChain A 〈PDB〉 h1 h2 h3 h4 h5 h6 h7 h8 h9 h10 h11 h12 h_all [Complex (Oxidoreductase/Antibody)]Cryo-Structure Of The Paracoccus Denitrificans Four-Subunit Cytochrome C Oxidase In The Completely Oxidized State Complexed With An Antibody Fv Fragment.
1qm8 〈PDB〉 h1 h2 h3 h4 h5 h6 h7 h_all [Photoreceptor]Structure Of Bacteriorhodopsin At 100 K.
1uazのChain A 〈PDB〉 h1 h2 h3 h4 h5 h6 h7 h_all [Proton Transport]Crystal Structure Of Archaerhodopsin-1.
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