Toll様受容体のユニークな馬蹄形構造の維持にはロイシンリッチリピート(LRR)が重要な役割を担っていると言われます。このページではToll様受容体以外の特徴的な構造を持つタンパク質との比較をしてみます。
|
バックボーン 二次構造 全選択 タンパク質選択 A・B鎖(TLR4)選択 リガンド選択 Leu選択 BCAA球表示(Leu Ile Val) 空間充填 球棒 球60% スティック 針金 アミノ色 Chain色 CPK色 ∥ Jmol色 Rasmol色 酸性・中性・塩基性区別 極性・非極性区別 疎水性インデックス順 I/O値順(特性基 R) 等電点順 コンホメーション選択性(αヘリックス・βストランド)# 糖鎖別着色: Gal,α-Glc,β-Glc,Man,Fuc,Xyl,Sia,GalNAc,GlcNAc,GlcA 水素結合(太) OFF 背景・黒 灰 白 紺 |
$ “BCAA球表示(Leu Ile Val)”は以下のアミノ酸配列表と同色で50%球表示になります。表示変更後は3種のアミノ酸残基が選択された状態になっていますので,球サイズ変更やアミノ色指定(この場合は全アミノ酸が対応色に)などが可能です(以下同)。
Glu | Pro | Cys | Val | Glu | Val | Val | Pro | Asn | Ile | Thr | Tyr | Gln | Cys | Met | Glu | Leu | Asn | Phe | Tyr | Lys | Ile | Pro | Asp | Asn |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Leu | Pro | Phe | Ser | Thr | Lys | Asn | Leu | Asp | Leu | Ser | Phe | Asn | Pro | Leu | Arg | His | Leu | Gly | Ser | Tyr | Ser | Phe | Phe | Ser |
Phe | Pro | Glu | Leu | Gln | Val | Leu | Asp | Leu | Ser | Arg | Cys | Glu | Ile | Gln | Thr | Ile | Glu | Asp | Gly | Ala | Tyr | Gln | Ser | Leu |
Ser | His | Leu | Ser | Thr | Leu | Ile | Leu | Thr | Gly | Asn | Pro | Ile | Gln | Ser | Leu | Ala | Leu | Gly | Ala | Phe | Ser | Gly | Leu | Ser |
Ser | Leu | Gln | Lys | Leu | Val | Ala | Val | Glu | Thr | Asn | Leu | Ala | Ser | Leu | Glu | Asn | Phe | Pro | Ile | Gly | His | Leu | Lys | Thr |
Leu | Lys | Glu | Leu | Asn | Val | Ala | His | Asn | Leu | Ile | Gln | Ser | Phe | Lys | Leu | Pro | Glu | Tyr | Phe | Ser | Asn | Leu | Thr | Asn |
Leu | Glu | His | Leu | Asp | Leu | Ser | Ser | Asn | Lys | Ile | Gln | Ser | Ile | Tyr | Cys | Thr | Asp | Leu | Arg | Val | Leu | His | Gln | Met |
Pro | Leu | Leu | Asn | Leu | Ser | Leu | Asp | Leu | Ser | Leu | Asn | Pro | Met | Asn | Phe | Ile | Gln | Pro | Gly | Ala | Phe | Lys | Glu | Ile |
Arg | Leu | His | Lys | Leu | Thr | Leu | Arg | Asn | Asn | Phe | Asp | Ser | Leu | Asn | Val | Met | Lys | Thr | Cys | Ile | Gln | Gly | Leu | Ala |
Gly | Leu | Glu | Val | His | Arg | Leu | Val | Leu | Gly | Glu | Phe | Arg | Asn | Glu | Gly | Asn | Leu | Glu | Lys | Phe | Asp | Lys | Ser | Ala |
Leu | Glu | Gly | Leu | Cys | Asn | Leu | Thr | Ile | Glu | Glu | Phe | Arg | Leu | Ala | Tyr | Leu | Asp | Tyr | Tyr | Leu | Asp | Asp | Ile | Ile |
Asp | Leu | Phe | Asn | Cys | Leu | Thr | Asn | Val | Ser | Ser | Phe | Ser | Leu | Val | Ser | Val | Thr | Ile | Glu | Arg | Val | Lys | Asp | Phe |
Ser | Tyr | Asn | Phe | Gly | Trp | Gln | His | Leu | Glu | Leu | Val | Asn | Cys | Lys | Phe | Gly | Gln | Phe | Pro | Thr | Leu | Lys | Leu | Lys |
Ser | Leu | Lys | Arg | Leu | Thr | Phe | Thr | Ser | Asn | Lys | Gly | Gly | Asn | Ala | Phe | Ser | Glu | Val | Asp | Leu | Pro | Ser | Leu | Glu |
Phe | Leu | Asp | Leu | Ser | Arg | Asn | Gly | Leu | Ser | Phe | Lys | Gly | Cys | Cys | Ser | Gln | Ser | Asp | Phe | Gly | Thr | Thr | Ser | Leu |
Lys | Tyr | Leu | Asp | Leu | Ser | Phe | Asn | Gly | Val | Ile | Thr | Met | Ser | Ser | Asn | Phe | Leu | Gly | Leu | Glu | Gln | Leu | Glu | His |
Leu | Asp | Phe | Gln | His | Ser | Asn | Leu | Lys | Gln | Met | Ser | Glu | Phe | Ser | Val | Phe | Leu | Ser | Leu | Arg | Asn | Leu | Ile | Tyr |
Leu | Asp | Ile | Ser | His | Thr | His | Thr | Arg | Val | Ala | Phe | Asn | Gly | Ile | Phe | Asn | Gly | Leu | Ser | Ser | Leu | Glu | Val | Leu |
Lys | Met | Ala | Gly | Asn | Ser | Phe | Gln | Glu | Asn | Phe | Leu | Pro | Asp | Ile | Phe | Thr | Glu | Leu | Arg | Asn | Leu | Thr | Phe | Leu |
Asp | Leu | Ser | Gln | Cys | Gln | Leu | Glu | Gln | Leu | Ser | Pro | Thr | Ala | Phe | Asn | Ser | Leu | Ser | Ser | Leu | Gln | Val | Leu | Asn |
Met | Ser | His | Asn | Asn | Phe | Phe | Ser | Leu | Asp | Thr | Phe | Pro | Tyr | Lys | Cys | Leu | Asn | Ser | Leu | Gln | Val | Leu | Asp | Tyr |
Ser | Leu | Asn | His | Ile | Met | Thr | Ser | Lys | Lys | Gln | Glu | Leu | Gln | His | Phe | Pro | Ser | Ser | Leu | Ala | Phe | Leu | Asn | Leu |
Thr | Gln | Asn | Asp | Phe | Ala | Cys | Thr | Cys | Glu | His | Gln | Ser | Phe | Leu | Gln | Trp | Ile | Lys | Asp | Gln | Arg | Gln | Leu | Leu |
Val | Glu | Val | Glu | Arg | Met | Glu | Cys | Ala | Thr | Pro | Ser | Asp | Lys | Gln | Gly | Met | Pro | Val | Leu | Ser | Leu | Asn | Ile | Thr |
Cys | Gln | Met | Asn | Lys |
|
バックボーン 二次構造 DNA/RNA(ATGCU,backbone) 全選択 タンパク質選択 リガンド選択 Leu選択 BCAA球表示(Leu Ile Val) DNA/RNA選択 同backbone選択 空間充填 球棒 球60% スティック 針金 アミノ色 Chain色 CPK色 ∥ Jmol色 Rasmol色 酸性・中性・塩基性区別 極性・非極性区別 疎水性インデックス順 I/O値順(特性基 R) 等電点順 コンホメーション選択性(αヘリックス・βストランド)# 水素結合(太) OFF 背景・黒 灰 白 紺 |
Met | Lys | Arg | Arg | Ile | Arg | Arg | Glu | Arg | Asn | Lys | Met | Ala | Ala | Ala | Lys | Ser | Arg | Asn | Arg | Arg | Arg | Glu | Leu | Thr |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Asp | Thr | Leu | Gln | Ala | Glu | Thr | Asp | Gln | Leu | Glu | Asp | Glu | Lys | Ser | Ala | Leu | Gln | Thr | Glu | Ile | Ala | Asn | Leu | Leu |
Lys | Glu | Lys | Glu | Lys | Leu |
|
バックボーン 二次構造 全選択 タンパク質選択 リガンド選択 Leu選択 BCAA球表示(Leu Ile Val) 空間充填 球棒 球60% スティック 針金 アミノ色 Chain色 CPK色 ∥ Jmol色 Rasmol色 酸性・中性・塩基性区別 極性・非極性区別 疎水性インデックス順 I/O値順(特性基 R) 等電点順 コンホメーション選択性(αヘリックス・βストランド)# 水素結合(太) OFF 背景・黒 灰 白 紺 |
Val | Leu | Ser | Pro | Ala | Asp | Lys | Thr | Asn | Val | Lys | Ala | Ala | Trp | Gly | Lys | Val | Gly | Ala | His | Ala | Gly | Glu | Tyr | Gly |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Ala | Glu | Ala | Leu | Glu | Arg | Met | Phe | Leu | Ser | Phe | Pro | Thr | Thr | Lys | Thr | Tyr | Phe | Pro | His | Phe | Asp | Leu | Ser | His |
Gly | Ser | Ala | Gln | Val | Lys | Gly | His | Gly | Lys | Lys | Val | Ala | Asp | Ala | Leu | Thr | Asn | Ala | Val | Ala | His | Val | Asp | Asp |
Met | Pro | Asn | Ala | Leu | Ser | Ala | Leu | Ser | Asp | Leu | His | Ala | His | Lys | Leu | Arg | Val | Asp | Pro | Val | Asn | Phe | Lys | Leu |
Leu | Ser | His | Cys | Leu | Leu | Val | Thr | Leu | Ala | Ala | His | Leu | Pro | Ala | Glu | Phe | Thr | Pro | Ala | Val | His | Ala | Ser | Leu |
Asp | Lys | Phe | Leu | Ala | Ser | Val | Ser | Thr | Val | Leu | Thr | Ser | Lys | Tyr | Arg |
|
バックボーン 二次構造 全選択 タンパク質選択 リガンド選択 Leu選択 BCAA球表示(Leu Ile Val) 空間充填 球棒 球60% スティック 針金 アミノ色 Chain色 CPK色 ∥ Jmol色 Rasmol色 酸性・中性・塩基性区別 極性・非極性区別 疎水性インデックス順 I/O値順(特性基 R) 等電点順 コンホメーション選択性(αヘリックス・βストランド)# 水素結合(太) OFF 背景・黒 灰 白 紺 |
Thr | Thr | Glu | Thr | Ile | Gln | Ser | Asn | Ala | Asn | Leu | Ala | Pro | Leu | Pro | Pro | His | Val | Pro | Glu | His | Leu | Val | Phe | Asp |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Phe | Asp | Met | Tyr | Asn | Pro | Ser | Asn | Leu | Ser | Ala | Gly | Val | Gln | Glu | Ala | Trp | Ala | Val | Leu | Gln | Glu | Ser | Asn | Val |
Pro | Asp | Leu | Val | Trp | Thr | Arg | Cys | Asn | Gly | Gly | His | Trp | Ile | Ala | Thr | Arg | Gly | Gln | Leu | Ile | Arg | Glu | Ala | Tyr |
Glu | Asp | Tyr | Arg | His | Phe | Ser | Ser | Glu | Cys | Pro | Phe | Ile | Pro | Arg | Glu | Ala | Gly | Glu | Ala | Tyr | Asp | Phe | Ile | Pro |
Thr | Ser | Met | Asp | Pro | Pro | Glu | Gln | Arg | Gln | Phe | Arg | Ala | Leu | Ala | Asn | Gln | Val | Val | Gly | Met | Pro | Val | Val | Asp |
Lys | Leu | Glu | Asn | Arg | Ile | Gln | Glu | Leu | Ala | Cys | Ser | Leu | Ile | Glu | Ser | Leu | Arg | Pro | Gln | Gly | Gln | Cys | Asn | Phe |
Thr | Glu | Asp | Tyr | Ala | Glu | Pro | Phe | Pro | Ile | Arg | Ile | Phe | Met | Leu | Leu | Ala | Gly | Leu | Pro | Glu | Glu | Asp | Ile | Pro |
His | Leu | Lys | Tyr | Leu | Thr | Asp | Gln | Met | Thr | Arg | Pro | Asp | Gly | Ser | Met | Thr | Phe | Ala | Glu | Ala | Lys | Glu | Ala | Leu |
Tyr | Asp | Tyr | Leu | Ile | Pro | Ile | Ile | Glu | Gln | Arg | Arg | Gln | Lys | Pro | Gly | Thr | Asp | Ala | Ile | Ser | Ile | Val | Ala | Asn |
Gly | Gln | Val | Asn | Gly | Arg | Pro | Ile | Thr | Ser | Asp | Glu | Ala | Lys | Arg | Met | Cys | Gly | Leu | Leu | Leu | Val | Gly | Gly | Leu |
Asp | Thr | Val | Val | Asn | Phe | Leu | Ser | Phe | Ser | Met | Glu | Phe | Leu | Ala | Lys | Ser | Pro | Glu | His | Arg | Gln | Glu | Leu | Ile |
Gln | Arg | Pro | Glu | Arg | Ile | Pro | Ala | Ala | Cys | Glu | Glu | Leu | Leu | Arg | Arg | Phe | Ser | Leu | Val | Ala | Asp | Gly | Arg | Ile |
Leu | Thr | Ser | Asp | Tyr | Glu | Phe | His | Gly | Val | Gln | Leu | Lys | Lys | Gly | Asp | Gln | Ile | Leu | Leu | Pro | Gln | Met | Leu | Ser |
Gly | Leu | Asp | Glu | Arg | Glu | Asn | Ala | Cys | Pro | Met | His | Val | Asp | Phe | Ser | Arg | Gln | Lys | Val | Ser | His | Thr | Thr | Phe |
Gly | His | Gly | Ser | His | Leu | Cys | Leu | Gly | Gln | His | Leu | Ala | Arg | Arg | Glu | Ile | Ile | Val | Thr | Leu | Lys | Glu | Trp | Leu |
Thr | Arg | Ile | Pro | Asp | Phe | Ser | Ile | Ala | Pro | Gly | Ala | Gln | Ile | Gln | His | Lys | Ser | Gly | Ile | Val | Ser | Gly | Val | Gln |
Ala | Leu | Pro | Leu | Val | Trp | Asp | Pro | Ala | Thr | Thr | Lys | Ala | Val |
|
バックボーン 二次構造 全選択 タンパク質選択 リガンド選択 Leu選択 BCAA球表示(Leu Ile Val) 空間充填 球棒 球60% スティック 針金 アミノ色 Chain色 CPK色 ∥ Jmol色 Rasmol色 酸性・中性・塩基性区別 極性・非極性区別 疎水性インデックス順 I/O値順(特性基 R) 等電点順 コンホメーション選択性(αヘリックス・βストランド)# 水素結合(太) OFF 背景・黒 灰 白 紺 |
Met | Ser | Lys | Gly | Glu | Glu | Leu | Phe | Thr | Gly | Val | Val | Pro | Ile | Leu | Val | Glu | Leu | Asp | Gly | Asp | Val | Asn | Gly | His |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Lys | Phe | Ser | Val | Ser | Gly | Glu | Gly | Glu | Gly | Asp | Ala | Thr | Tyr | Gly | Lys | Leu | Thr | Leu | Lys | Phe | Ile | Cys | Thr | Thr |
Gly | Lys | Leu | Pro | Val | Pro | Trp | Pro | Thr | Leu | Val | Thr | Thr | Phe | Ser | Tyr | Gly | Val | Gln | Cys | Phe | Ser | Arg | Tyr | Pro |
Asp | His | Met | Lys | Arg | His | Asp | Phe | Phe | Lys | Ser | Ala | Met | Pro | Glu | Gly | Tyr | Val | Gln | Glu | Arg | Thr | Ile | Phe | Phe |
Lys | Asp | Asp | Gly | Asn | Tyr | Lys | Thr | Arg | Ala | Glu | Val | Lys | Phe | Glu | Gly | Asp | Thr | Leu | Val | Asn | Arg | Ile | Glu | Leu |
Lys | Gly | Ile | Asp | Phe | Lys | Glu | Asp | Gly | Asn | Ile | Leu | Gly | His | Lys | Leu | Glu | Tyr | Asn | Tyr | Asn | Ser | His | Asn | Val |
Tyr | Ile | Met | Ala | Asp | Lys | Gln | Lys | Asn | Gly | Ile | Lys | Val | Asn | Phe | Lys | Ile | Arg | His | Asn | Ile | Glu | Asp | Gly | Ser |
Val | Gln | Leu | Ala | Asp | His | Tyr | Gln | Gln | Asn | Thr | Pro | Ile | Gly | Asp | Gly | Pro | Val | Leu | Leu | Pro | Asp | Asn | His | Tyr |
Leu | Ser | Thr | Gln | Ser | Ala | Leu | Ser | Lys | Asp | Pro | Asn | Glu | Lys | Arg | Asp | His | Met | Val | Leu | Leu | Glu | Phe | Val | Thr |
Ala | Ala | Gly | Ile | Thr | His | Gly | Met | Asp | Glu | Leu | Tyr | Lys |
|
バックボーン 二次構造 全選択 タンパク質選択 リガンド選択 Leu選択 BCAA球表示(Leu Ile Val) 空間充填 球棒 球60% スティック 針金 アミノ色 Chain色 CPK色 ∥ Jmol色 Rasmol色 酸性・中性・塩基性区別 極性・非極性区別 疎水性インデックス順 I/O値順(特性基 R) 等電点順 コンホメーション選択性(αヘリックス・βストランド)# 水素結合(太) OFF 背景・黒 灰 白 紺 |
Ala | Leu | His | Trp | Arg | Ala | Ala | Gly | Ala | Ala | Thr | Val | Leu | Leu | Val | Ile | Val | Leu | Leu | Ala | Gly | Ser | Tyr | Leu | Ala |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Val | Leu | Ala | Glu | Arg | Gly | Ala | Pro | Gly | Ala | Gln | Leu | Ile | Thr | Tyr | Pro | Arg | Ala | Leu | Trp | Trp | Ser | Val | Glu | Thr |
Ala | Thr | Thr | Val | Gly | Tyr | Gly | Asp | Leu | Tyr | Pro | Val | Thr | Leu | Trp | Gly | Arg | Cys | Val | Ala | Val | Val | Val | Met | Val |
Ala | Gly | Ile | Thr | Ser | Phe | Gly | Leu | Val | Thr | Ala | Ala | Leu | Ala | Thr | Trp | Phe | Val | Gly | Arg | Glu | Gln |