以下のPDBのID・Chain名をクリックすると左下の表示画面にモデルが表示され, 右下のボタンで表示変更が可能です。 〈　〉内の“参考”をクリックすれば別窓に本サイトの関連資料が表示され, “PDB”をクリックすればRCSB PDBのオリジナルデータが参照できます。

※2007/07以降は新データ形式になり拡張子はentにしてあります（PDBjのアナウンス参照；それ以前はpdb）。新データ形式ではDNAの塩基（ATGC）の記載方法が変更されたため, 一部の表示変更が機能しませんのでご注意ください。
※2009/08以降，これまでPQSでデータを入手していた多量体データをRCSB PDBでも参照できるようになりました。それを利用したものはPDB IDの直後の括弧内に“n量体”（nは数字）と明記しています。また上掲新規データでは“xxxx~n”（xxxxがPDB ID）と記しています（例：1uun~8）。

• 2003/01〜： 117e_A, 188l, 11ba_B, 1a4g_A, 1a4m_A, 1a6v_LH, 1a9x_A, 1adb_A, 1aq1, 1arg_Ab, 4at1_B, 1axs_LH, 1az1, 1bo4_A, 1btc, 1bzf_1, 1c8m_1, 1cgp_A, 6cha_A, 1ckp, 3cln, 4csm_A, 1dz8_A, 1dze, 1dzm_B, 1e0p_A, 1e4y_A, 1ea1, 1ere_A, 1eta_1, 1eul, 1eve, 2fke, 1frp_A, 3gct, 1gjm, 1gm6, 1gp6, 1gqw_A, 1gvr, 1h11, 1h4s_A, 1h7x_A, 1hbp, 1hdq, 1he8_B, 1hfs, 1hii, 1i3u, 1iei, 1ing_A, 1inh_A, 1iny, 2ito, 1j4r_A, 1kw8, 1kw9, 1lgt, 1lkd, 1lld_A, 1lth_T, 1ncx, 1ncz, 1ocl_A, 1og5_A, 1ol7, 1p9s_A, 2pk4, 2prg_A, 1psd_A, 1qmq, 6rsa, 8rsa_A, 1rta, 8ruc_A, 1sdy_A, 1slt_A, 1sxs_A, 1sxz_A, 1teh_A, 1tha_A, 1thc_A, 1us0, 1uv6_A-E, 1uw6_A-E, 1xva_AのLigand＋SITE（結合部位, 活性部位）データ追加
  ［注1］ * はWater表示が可能なデータ, # はSITE表示のために原子団No.を一部変更したデータ, ## はその他の加工データ, %はColor→Temperature表示が有効のデータです．
  ［注2］ [　] 内は以下の文献の掲載ページ（例： [1-69] は文献1のp.69）, または参考キーワード．
  1) 岡崎進・岡本裕幸 編, 「生体系のコンピュータ・シミュレーション」, 化学同人(2002)
  2) 広川貴次・美宅成樹, 「できるバイオインフォマティクス」, 中山書店(2002)
  3) 菅原秀明 編, 「あなたにも役立つバイオインフォマティクス」, 共立出版(2002)
  4) 美宅成樹・榊佳之 編, 「バイオインフォマティクス」, 東京化学同人(2003)
  5) T.A.Brown 著, 村松正実 監訳, 「ゲノム 第2版　新しい生命情報システムへのアプローチ」, メディカル・サイエンス・インターナショナル(2003)
  6) 中村義一 編, 「RNAがわかる」, 羊土社(2003)
  7) C.K.Mathews ほか著, 清水孝雄 ほか監訳, 「カラー生化学」, 西村書店(2003)
  8) Molecule of the Month（Protein Data Bank, 2003/09）, Estrogen Receptor／Estrogen and Cancer／Exploring the Structure／List
  9) 大島泰郎・西村善文・横山茂之・中村春木 編, 「構造プロテオミクス −蛋白質ネットワークの構造生物学−」, 共立出版(2003)
  10) 北泰行・平岡哲夫 編, 「創薬化学　−有機合成からのアプローチ−」, 東京化学同人(2004)
  11) B.D.Gomperts ほか著, 上代淑人 監訳, 「シグナル伝達　生命システムの情報ネットワーク」, メディカル・サイエンス・インターナショナル(2004)
  12) 長野哲雄・夏苅英昭・原博 編, 「創薬化学」, 東京化学同人(2004)
  13) 田之倉優 編, 「タンパク質のかたちから生命のなぞを解く　生物マシーナリー構造生物学の最前線」, クバプロ(2005)
  14) G.A.Petsko・D.Ringe 著, 横山茂之 監訳, 宮島郁子 訳, 「カラー図説　タンパク質の構造と機能」, メディカル・サイエンス・インターナショナル(2005)　※参考：対称構造を持つオリゴマータンパク質の例
  15) M.E.Taylor・K.Drickamer 著, 西村紳一郎・門出健次 監訳, 「糖鎖生物学入門」, 化学同人(2005)　※参考：糖鎖を含むタンパク質
  16) Arthur M. Lesk 著, 高木淳一 訳, 「ポストゲノム時代のタンパク質科学　構造・機能・ゲノミクス」, 化学同人(2007)
  

2k0t 〈PDB〉 [オキサリプラチン]
High Resolution Solution NMR Structures of Oxaliplatin-DNA Adduct.

1k1b 〈PDB〉
Crystal Structure Of The Ankyrin Repeat Domain Of Bcl-3: A Unique Member Of The Ikappab Protein Family.

1k28のChain A 〈PDB〉 [T4ファージ]
The Structure Of The Bacteriophage T4 Cell-Puncturing Device.

2k33のModel 1 〈PDB〉 [N-グリコシル化タンパク質]
Solution structure of an N-glycosylated protein using in vitro glycosylation.

1k4c ｜ Chain C% ‖ 参考：PQSによる十二量体 〈PDB，Molecule of the Month〉 [カリウムチャネル → Wikipedia]
Potassium Channel Kcsa-Fab Complex In High Concentration Of K+.

1k4dのChain C% 〈PDB〉 [カリウムチャネル]
Potassium Channel Kcsa-Fab Complex In Low Concentration Of K+.

2k4gのModel 1 〈PDB〉 [ペプチド核酸（PNA）]
Solution Structure of a Peptide Nucleic Acid Duplex, 10 structures.

2k6bのModel 1 〈PDB〉 [プログラム細胞死 / PDCD5 / アポトーシス]
Solution structure of 1-112 fragment of human programmed cell death 5 protein.

1k8p* 〈資料，PDB〉 [テロメアDNA / G-四重らせん構造]　 G-四量体例選択（5,11,17,23）
Structure Of The Human G-Quadruplex Reveals A Novel Topology.

1k93のChain A・D 〈PDB，Molecule of the Month〉 [炭疽菌の浮腫因子（EF） / カルモジュリン]
Crystal structure of the adenylyl cyclase domain of anthrax edema factor (EF) in complex with calmodulin.

1kacの6量体（Chain AB×3） 〈PDB，今月の分子〉 [アデノウイルス]
KNOB DOMAIN FROM ADENOVIRUS SEROTYPE 12 IN COMPLEX WITH DOMAIN 1 OF ITS CELLULAR RECEPTOR CAR.

2kalのModel 1 〈PDB〉 [メチル化DNA]　 メチル基選択
NMR structure of fully methylated GATC site.

2kceのChain A 〈資料１・２，PDB〉
Binding Of The Anticancer Drug Zd1694 To E. Coli Thymidylate Synthase: Assessing Specificity and Affinity.

2kdhのModel 1 〈PDB〉 [心筋トロポニンC / エピガロカテキンガレート（EGCG） / ポリフェノール]
The Solution Structure of Human Cardiac Troponin C in complex with the Green Tea Polyphenol; (-)-epigallocatechin-3-gallate.

1keeのChain B・F 〈PDB〉
Inactivation Of The Amidotransferase Activity Of Carbamoyl Phosphate Synthetase By The Antibiotic Acivicin.

1kenのChain A-F 〈資料，PDB〉 [インフルエンザウイルスのヘマグルチニン]
Influenza Virus Hemagglutinin Complexed With An Antibody That Prevents The Hemagglutinin Low pH Fusogenic Transition.

1kf1* ｜ TTAGGGの例 [テロメア / G-四重らせん構造] 〈資料，PDB〉　 G-四量体例選択（4,10,16,22）　 TTAGGG配列例（5-10）
Structure and Packing Of Human Telomeric DNA.

1kfaのChain H 〈PDB〉 [ジベレリン A₄]
Crystal Structure Of Fab Fragment Complexed With Gibberellin A4.

1ki2のChain A* 〈PDB〉
Crystal Structure Of Thymidine Kinase From Herpes Simplex Virus Type I Complexed With Ganciclovir.

3kin 〈PDB〉 [キネシン]
Kinesin (Dimeric) From Rattus Norvegicus.

1kjl 〈PDB〉 [ガレクチン-3]
High Resolution X-Ray Structure of Human Galectin-3 in complex with LacNAc.

1kjyのChain A・B 〈PDB〉
Crystal Structure Of Human G[α]I1 Bound To The Goloco Motif Of Rgs14.

3kmbのChain 1 〈PDB〉
Complex Of 3'-Sulfo-Lewis-X With A Selectin-Like Mutant Of Mannose-Binding Protein A.

1kn0* ｜ Chain A 〈PDB〉 [Rad52（理研）]
Crystal Structure Of The Human Rad52 Protein.

1knuのChain A 〈PDB〉
Ligand Binding Domain Of The Human Peroxisome Proliferator Activated Receptor γ In Complex With A Synthetic Agonist.

1koc 〈PDB〉 [RNAアプタマー]
RNA Aptamer Complexed With Arginine, NMR.

3kp2 〈PDB〉 [ペニシリンG]
Staphylococcus epidermidis TcaR in complex with penicillin G.

1kpx 〈PDB〉 [赤錐体色素（theoretical model）]
THEORETICAL MODEL OF RED CONE PIGMENT.

1kse 〈PDB〉
Solution Structure Of A Quinolone-Capped DNA Duplex.

1kw8 ｜ (SITE) $4 〈PDB〉 [9-852 / BphC]
Crystal Structure Of Bphc-2,3-Dihydroxybiphenyl-No Complex.
$4 文献9，p.852口絵3の活性中心（NOあり；1kw9・1lgtも参照）．

1kw9 ｜ (SITE) $4 〈PDB〉 [9-852 / BphC]
Crystal Structure Of 2,3-Dihydroxybiphenyl Dioxygenase (Bphc) In Complex With 2,3-Dihydroxybiphenyl At 2.0Å Resolution.
$4 文献9，p.852口絵3の活性中心（NOなし；1kw8・1lgtも参照）．

3kwy 〈PDB〉 [レチノイドX受容体（RXR） / 環境ホルモン / トリフェニルスズ]
Crystal structure of RXRalpha ligand binding domain in complex with triphenyltin and a coactivator fragment.

1kx5 〈PDB〉 [ヌクレオソームコア粒子]
X-Ray Structure Of The Nucleosome Core Particle, Ncp147, At 1.9 Å Resolution.

3l0f | 12量体（Chain A・B×6）α炭素のみ 〈PDB〉 [光合成 / 集光性タンパク質 / フィコシアニン / フィコシアノビリン]
High resolution structure of C-Phycocyanin from Thermosynechococcus elongatus.

1l0i 〈PDB，Molecule of the Month，今月の分子〉 [アシルキャリアータンパク質（ACP）]
Crystal structure of butyryl-ACP I62M mutant.

1l2iのChain A・C 〈PDB〉
Human Estrogen Receptor α Ligand-Binding Domain In Complex With (R, R)-5,11-Cis-Diethyl-5,6,11,12- Tetrahydrochrysene-2,8-Diol and A Glucocorticoid Receptor Interacting Protein 1 Nr Box II Peptide.

3l2t* 〈PDB〉 [ラルテグラビル（MK-0518，HIVインテグラーゼ阻害剤）]
Crystal structure of the Prototype Foamy Virus (PFV) intasome in complex with magnesium and MK0518 (Raltegravir).

3l2u〈PDB〉 [elvitegravir（GS-9137，JTK-303，HIVインテグラーゼ阻害剤]
Crystal structure of the Prototype Foamy Virus (PFV) intasome in complex with magnesium and GS9137 (Elvitegravir).

1l3eのModel 1 〈資料，PDB〉
NMR Structures Of The Hif-1α Ctad/P300 Ch1 Complex.

1l3w* ‖ 参考：PQSによる二量体* 〈PDB，Molecule of the Month，今月の分子〉 [C-カドヘリン]
C-cadherin Ectodomain.

1l5qのChain A　 カフェイン選択 〈PDB〉 [グリコーゲンホスホリラーゼ / カフェイン]
Human liver glycogen phosphorylase a complexed with caffeine, N-Acetyl-beta-D-glucopyranosylamine, and CP-403700.

1l6x 〈PDB〉 [抗がん剤リツキシマブ（リツキサン）]
FC FRAGMENT OF RITUXIMAB BOUND TO A MINIMIZED VERSION OF THE B-DOMAIN FROM PROTEIN A CALLED Z34C.

1l7f 〈PDB〉
Crystal Structure Of Influenza Virus Neuraminidase In Complex With Bcx-1812.

1l7sのChain H 〈PDB〉
Crystal Structure Analysis Of The Anti-Testosterone Fab In Complex With Testosterone.

1l8t 〈PDB，今月の分子〉 [アミノグリコシドホスホトランスフェラーゼ / 薬剤耐性 / カナマイシンA]
Crystal Structure Of 3',5"-Aminoglycoside Phosphotransferase Type IIIa ADP Kanamycin A Complex.

3l8w ｜ 4量体（α炭素のみ） 〈PDB〉 [尿酸オキシダーゼ]
Urate oxidase from aspergillus flavus complexed with xanthin.

1l9hのChain A 〈PDB，Molecule of the Month〉
Crystal Structure Of Bovine Rhodopsin At 2.6 Angstroms Resolution.

2lbd 〈PDB〉
Ligand-Binding Domain Of The Human Retinoic Acid Receptor γ Bound To All-Trans Retinoic Acid.

3ldh ‖ 参考：PQSによる四量体 〈PDB，Molecule of the Month，今月の分子〉 [乳酸デヒドロゲナーゼ]
A COMPARISON OF THE STRUCTURES OF APO DOGFISH M4 LACTATE DEHYDROGENASE AND ITS TERNARY COMPLEXES.

1ldnのChain A-D* 〈PDB〉 [14-45]
Structure of a ternary complex of an allosteric lactate dehydrogenase from Bacillus stearothermophilus at 2.5 Å resolution.

3leuのModel 1 〈PDB〉
High Resolution 1H NMR Study Of Leucocin A In Dodecylphosphocholine Micelles, 19 Structures (1:40 Ratio Of Leucocin A: Dpc) (0.1% Tfa).

1lgc* 〈PDB〉 [イソレクチン]
INTERACTION OF A LEGUME LECTIN WITH THE N2 FRAGMENT OF HUMAN LACTOTRANSFERRIN OR WITH THE ISOLATED BIANTENNARY GLYCOPEPTIDE: ROLE OF THE FUCOSE MOIETY.

1lgt ｜ (SITE) $4' 〈PDB〉 [(9-852) / DHBD / PCB]
Crystal Structure Of 2,3-Dihydroxybiphenyl 1,2-Dioxygenase (Dhbd) Complexed With 2'-Cl Dihydroxybiphenyl (Dhb).
$4' 文献9，p.852口絵3の活性中心に準拠（NOなし；His146,His210,Glu260で1kw8・1kw9と異なる）．

1lnq 〈PDB，Molecule of the Month〉 [カリウムチャネル → Wikipedia]
CRYSTAL STRUCTURE OF MTHK AT 3.3 A.

1lib 〈PDB〉
The adipocyte lipid-binding protein at 1.6-Å resolution. Crystal structures of the apoprotein and with bound saturated and unsaturated fatty acids.

1ljtのChain A* 〈PDB〉 [マクロファージ遊走阻止因子（MIF） / 14-157]
Crystal Structure of Macrophage Migration Inhibitory Factor complexed with (S,R)-3-(4-hydroxyphenyl)-4,5-dihydro-5-isoxazole-acetic acid methyl ester (ISO-1).

1ljwのChain A 〈PDB〉 [ヘモグロビン / 一酸化炭素]
Crystal Structure Of Human Carbonmonoxy Hemoglobin At 2.16 Å: A Snapshot Of The Allosteric Transition.

1lkd ｜ (SITE) $4' 〈PDB〉 [(9-852) / DHBD / PCB / バイオレメディエーション]
Crystal Structure Of 2,3-Dihydroxybiphenyl 1,2-Dioxygenase (Dhbd) Complexed With 2',6'-Dicl Dihydroxybiphenyl (Dhb).
$4' 文献9，p.852口絵3の活性中心に準拠（NOなし；His146,His210,Glu260で1kw8・1kw9と異なる）．

1ll5のChain A 〈PDB〉 [カルバペネム系抗生物質／イミペネム]
X-Ray Crystal Structure Of Ampc Wt β-Lactamase In Complex With Covalently Bound Imipenem.

1lldのChain A* ｜ SITE 〈資料，PDB〉
Molecular basis of allosteric activation of bacterial L-lactate dehydrogenase.

1ln6 〈PDB〉 [メタロドプシンII]
STRUCTURE OF BOVINE RHODOPSIN (Metarhodopsin II).

1loh 〈PDB〉 [ヒアルロン酸リアーゼ]
Streptococcus pneumoniae Hyaluronate Lyase in Complex with Hexasaccharide Hyaluronan Substrate.

1lpaのChain B## 〈PDB〉
Interfacial activation of the lipase-procolipase complex by mixed micelles revealed by X-ray crystallography.

1lpb##（BOG，MUPは座標2種のうちAのみ） 〈PDB〉 [アルキルホスホネート阻害剤]
THE 2.46 Å RESOLUTION STRUCTURE OF THE PANCREATIC LIPASE COLIPASE COMPLEX INHIBITED BY A C11 ALKYL PHOSPHONATE.

1lt4 〈PDB〉 [エンテロトキシン / アジュバント（adjuvant）]
HEAT-LABILE ENTEROTOXIN MUTANT S63K.

1lthのChain T*# ｜ SITE# 〈資料，PDB〉
T and R states in the crystals of bacterial L-lactate dehydrogenase reveal the mechanism for allosteric control.

1ltjのChain A，B，C，G，H ## 〈資料，PDB〉 [フィブリノーゲン]
Crystal Structure Of Recombinant Human Fibrinogen Fragment D With The Peptide Ligands Gly-Pro-Arg-Pro-Amide and Gly- His-Arg-Pro-Amide.

1lttのChain D・E・F・G・H 〈資料，PDB，Molecule of the Month〉 [エンテロトキシン]
Lactose binding to heat-labile enterotoxin revealed by X-ray crystallography.

1lucのChain A 〈資料，PDB〉
Bacterial Luciferase.

1luj 〈PDB〉 [β-カテニン / ICAT（β-カテニン結合因子）]
Crystal Structure of the Beta-catenin/ICAT Complex.

1lvoのChain A 〈PDB〉
Structure Of Coronavirus Main Proteinase Reveals Combination Of A Chymotrypsin Fold With An Extra α- Helical Domain.

1lwcのChain A 〈資料，PDB〉 [HIV / ネビラピン]
Crystal Structure Of M184V Mutant HIV-1 Reverse Transcriptase In Complex With Nevirapine.

2lyz 〈PDB〉 [リゾチーム]
Real-space refinement of the structure of hen egg-white lysozyme.

1lzj 〈PDB〉 [糖転移酵素]
Glycosyltransferase B + UDP + H antigen acceptor.

1m17 〈資料，PDB〉 [エルロチニブ]
Epidermal Growth Factor Receptor Tyrosine Kinase Domain With 4-Anilinoquinazoline Inhibitor Erlotinib.

1m1j 〈PDB，Molecule of the Month〉 [フィブリノーゲン]
Crystal structure of native chicken fibrinogen with two different bound ligands.

1m1kのChain A 3.15MB 〈PDB7.92MB〉 [アジスロマイシン]
Co-Crystal Structure Of Azithromycin Bound To The 50S Ribosomal Subunit Of Haloarcula Marismortui.

1m2fのModel 1 〈PDB〉 [Clock Protein]
Solution Structure Of The N-Terminal Domain Of Synechococcus Elongatus Kaia (Kaia135N); Family Of 25 Structures.

1m4fのModel 1 〈PDB〉
Solution Structure Of Hepcidin-25.

1m4hのChain A・C 〈PDB，Molecule of the Month，今月の分子〉 [β-セクレターゼ / 阻害剤OM00-3]
Crystal Structure of Beta-secretase complexed with Inhibitor OM00-3.

1m4iのChain A 〈PDB〉 [アミノグリコシド系抗生物質／カナマイシン A]
Aminoglycoside 2'-N-Acetyltransferase From Mycobacterium Tuberculosis-Complex With Coenzyme A and Kanamycin A.

1m52のChain B 〈PDB〉 [c-Ablキナーゼ]
Crystal Structure Of The C-Abl Kinase Domain In Complex With Pd173955.

1m5kのChain A・B・C 〈PDB〉 [ヘアピンリボザイム]
Crystal Structure Of A Hairpin Ribozyme In The Catalytically-Active Conformation.

1m5m* 〈PDB〉 [シアノビリン-N1（抗ウイルス性タンパク質）]
CRYSTAL STRUCTURE OF CYANOVIRIN-N COMPLEXED TO OLIGOMANNOSE-9 (MAN-9).

3m6g 〈PDB〉 [アクチン / lobophorolide]
Crystal structure of actin in complex with lobophorolide.

1m9qのChain A 〈PDB〉 [一酸化窒素合成酵素]
Human Endothelial Nitric Oxide Synthase With 5- Nitroindazole Bound.

3m9sのChain 1-9・H・L-N・RH・L-N・R鎖はアミノ酸種別不明 〈PDB，今月の分子〉 [複合体I]
Crystal structure of respiratory complex I from Thermus thermophilus.

1mai 〈PDB〉 [11-405 / PHドメイン / IP₃]
Structure Of The Pleckstrin Homology Domain From Phospholipase Cδ In Complex With Inositol Trisphosphate.

1mal 〈PDB〉 [βバレル，マルトポリン]
STRUCTURAL BASIS FOR SUGAR TRANSLOCATION THROUGH MALTOPORIN CHANNELS AT 3.1 ANGSTROMS RESOLUTION.

1mbn 〈PDB〉 [ミオグロビン / X線回折で最初に構造解明]
THE STEREOCHEMISTRY OF THE PROTEIN MYOGLOBIN.

1mc0* 〈PDB〉 [cGMP]
Regulatory Segment Of Mouse 3',5'-Cyclic Nucleotide Phosphodiesterase 2A, Containing The Gaf A and Gaf B Domains.

1mcoのChain H 〈PDB〉
Three-dimensional structure of a human immunoglobulin with a hinge deletion.

1melのChain A・L* 〈PDB，今月の分子〉 [ナノボディ（単一ドメイン抗体）]
CRYSTAL STRUCTURE OF A CAMEL SINGLE-DOMAIN VH ANTIBODY FRAGMENT IN COMPLEX WITH LYSOZYME.

3mfi##（A鎖は座標2種のうちAのみ）　 cis-syn チミン-チミン（T-T）二量体選択 〈PDB〉 [DNAポリメラーゼη（Polη） / チミン二量体]
DNA Polymerase Eta in Complex With a cis-syn Thymidine Dimer.

1mfr* ｜ Chain A* 〈PDB，Molecule of the Month〉 [フェリチン]
Crystal Structure Of M Ferritin.

3mg0 〈PDB〉 [プロテアソーム / ボルテゾミブ]
Structure of yeast 20S proteasome with bortezomib.

1mg1* 〈PDB〉 [HTLV-1]
HTLV-1 GP21 ECTODOMAIN/MALTOSE-BINDING PROTEIN CHIMERA.

1mhlのChain A・C* 〈PDB〉 [ミエロペルオキシダーゼ（MPO）]
Crystal Structure Of Human Myeloperoxidase Isoform C Crystallized In Space Group P2(1) At pH 5.5 and 20 Deg C.

3min 〈PDB〉 [ニトロゲナーゼ / MoFeコファクター / 鉄硫黄クラスターFe8S7]
NITROGENASE MOFE PROTEIN FROM AZOTOBACTER VINELANDII, OXIDIZED STATE.

1mjv 〈PDB〉 [細胞増殖因子A（VEGF-A）]
DISULFIDE DEFICIENT MUTANT OF VASCULAR ENDOTHELIAL GROWTH FACTOR A (C51A and C60A).

1ml5のChain B・C# ｜ anticodon-codon 〈PDB〉 [Ribosome; P-site tRNA(Phe), A- AND P-site mRNA codons / 6-21]
Structure Of The E. Coli Ribosomal Termination Complex With Release Factor 2.

1mme 〈PDB〉 [ハンマーヘッド型リボザイム]
THE CRYSTAL STRUCTURE OF AN ALL-RNA HAMMERHEAD RIBOZYME: A PROPOSED MECHANISM FOR RNA CATALYTIC CLEAVAGE.

1mmsのChain A・C ｜ SITE 〈PDB〉 [メチル水銀イオン]
Crystal Structure Of The Ribosomal Protein L11-RNA Complex.

4monのChain A・B 〈PDB〉 [甘味タンパク質モネリン]
Orthorhombic Monellin.

1mpt 〈PDB〉 [セリンプロテアーゼ（M-プロテアーゼ）]　 Asp32，His64，Ser216選択
CRYSTAL STRUCTURE OF A NEW ALKALINE SERINE PROTEASE (M-PROTEASE) FROM BACILLUS SP. KSM-K16.

1mqbのChain A 〈PDB〉
Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein Kinase.

1mqzのModel 1 〈PDB〉 [Lantibiotic]
NMR Solution Structure Of Type-B Lantibiotics Mersacidin Bound To Lipid II In Dpc Micelles.

3mr6 〈PDB〉 [DNA修復 / 紫外線 / DNAポリメラーゼη（Nature ハイライト]
Human DNA polymerase eta - DNA ternary complex with a CPD 2bp upstream of the active site (TT4).

2msbのChain B 〈PDB〉 [レクチン / 15-164]
Structure of a C-type mannose-binding protein complexed with an oligosaccharide.

1msl 〈PDB〉
Structure Of The Mscl Homologue From Mycobacterium Tuberculosis: A Gated Mechanosensitive Channel.

1msm 〈PDB〉 [HIVプロテアーゼ阻害剤KNI-764]
The HIV protease (mutant Q7K L33I L63I) complexed with KNI-764 (an inhibitor).

1mswのChain T・N・R 〈PDB〉 [RNA Polymerase]
Structural Basis For The Transition From Initiation To Elongation Transcription In T7 RNA Polymerase.

1muh ‖ 参考：PQSによる六量体（Chain A・B・C × 2） 〈PDB，Molecule of the Month〉 [トランスポゾン / トランスポザーゼ]
CRYSTAL STRUCTURE OF TN5 TRANSPOSASE COMPLEXED WITH TRANSPOSON END DNA.

1mui##（lopinavirは座標2種のうちAのみ） 〈PDB〉 [抗HIV薬ロピナビル]
Crystal Structure Of HIV-1 Protease Complexed With Lopinavir.

1mv9* 〈PDB〉 [DHA]
Crystal Structure Of The Human Rxr α Ligand Binding Domain Bound To The Eicosanoid Dha (Docosa Hexaenoic Acid) and A Coactivator Peptide.

1mw0 〈PDB〉
Amylosucrase Mutant E328Q Co-Crystallized With Maltoheptaose Then Soaked With Maltoheptaose.

1mx5のChain A-C 〈PDB〉 [肝カルボキシルエステラーゼ / ホマトロピン（抗コリン薬）]
Crystal Structure of Human Liver Carboxylesterase in complexed with homatropine, a cocaine analogue.

1mxk 〈PDB〉 [ブレオマイシン / DNA]
NMR Structure of HO2-Co(III)bleomycin A(2) Bound to d(GGAAGCTTCC)(2).

1myr 〈PDB〉 [ミロシナーゼ（辛味発生酵素） / グリコシダーゼ]
MYROSINASE FROM SINAPIS ALBA.

1n1f 〈PDB〉 [インターロイキン]
Crystal Structure Of Human Interleukin-19.

1n1l* 〈PDB〉 [C型肝炎ウイルス]
CRYSTAL STRUCTURE OF HCV NS3 PROTEASE DOMAIN:NS4A PEPTIDE COMPLEX WITH COVALENTLY BOUND INHIBITOR (GW472467X).

1n2zのChain A 〈資料，PDB〉
2.0 Å Structure Of Btuf, The Vitamin B12 Binding Protein Of E. Coli.

3n45の阻害剤含む2量体 〈PDB，Natureハイライト〉 [非ビスホスホネート型化合物によるファルネシルピロリン酸合成酵素（FPPS）阻害 / ゾレドロン酸（ゾレドロネート；ビスホスホネート系）]
Human FPPS complex with FBS_04 and zoledronic acid/MG2+.

1n4eのChain A・B ｜ チミン二量体部分 〈PDB〉 [Thymine Dimer]　 Dimerの不要結合削除
Crystal Structure Of A DNA Decamer Containing A Thymine- Dimer.

1n4k* 〈PDB〉 [IP₃受容体]
Crystal Structure Of The Inositol 1,4,5-Trisphosphate Receptor Binding Core In Complex With Ip3.

1n5yのChain A・P・T 〈資料，PDB〉 [HIV / ジドブジン(AZT)]
HIV-1 Reverse Transcriptase Crosslinked To Post- Translocation Aztmp-Terminated DNA (Complex P).

1n8z ｜ のChain A・B（Herceptin Fab） 〈PDB〉 [ErbB受容体 / 抗がん剤トラスツズマブ（トラツズマブ，商品名ハーセプチン）]
Crystal structure of extracellular domain of human HER2 complexed with Herceptin Fab.

1n91のModel 1 〈PDB〉 [o157]
Solution Structure Of The Hypothetical Protein Yggu From E. Coli. Northeast Structural Genomics Consortium Target Er14.

3na0のChain A・C 〈PDB〉 [P450 / CYP11A1 / 20,22-ジヒドロキシコレステロール]
Crystal structure of human CYP11A1 in complex with 20,22-dihydroxycholesterol.

1nb7のChain A・E 〈PDB〉 [C型肝炎ウイルス]
HC-J4 RNA polymerase complexed with short RNA template strand.

1nbfのChain A・D 〈PDB〉 [脱ユビキチン化酵素]
Crystal Structure Of A Ubp-Family Deubiquitinating Enzyme In Isolation and In Complex With Ubiquitin Aldehyde.

1nbk 〈PDB〉 [RNAアプタマー]
The Structure Of RNA Aptamer For HIV Tat Complexed With Two Argininamide Molecules.

1nch 〈PDB〉 [Yb]
STRUCTURAL BASIS OF CELL-CELL ADHESION BY CADHERINS.

1nci 〈PDB，Molecule of the Month，今月の分子〉 [N-カドヘリン]
STRUCTURAL BASIS OF CELL-CELL ADHESION BY CADHERINS.

1ncx* ｜ SITE1-2* 〈PDB〉 [Cd / EF-hand]
Troponin C.

1ncz* ｜ SITE1-2* 〈PDB〉 [Tb / EF-hand]
Troponin C.

1nd0のChain A・B・C・D 〈PDB〉
CATIONIC CYCLIZATION ANTIBODY 4C6 COMPLEX WITH TRANSITION STATE ANALOG.

1nek* 〈PDB〉 [コハク酸脱水素酵素]
Complex II (Succinate Dehydrogenase) From E. Coli with ubiquinone bound.

3ng5 〈PDB〉 [トランスサイレチン / エピガロカテキンガレート（EGCG）]
Crystal Structure of V30M transthyretin complexed with (-)-epigallocatechin gallate (EGCG).

3ngb ｜ Chain A-C〈PDB〉 [HIV-1 / gp120 / 抗体]
Crystal structure of broadly and potently neutralizing antibody VRC01 in complex with HIV-1 gp120.

1nhkのChain R## 〈PDB〉 [cAMP]
Crystal structure of Myxococcus xanthus nucleoside diphosphate kinase and its interaction with a nucleotide substrate at 2.0 Å resolution.

1nhz　 RU-486選択 〈PDB〉 [グルココルチコイド受容体 / RU-486]
Crystal Structure of the Antagonist Form of Glucocorticoid Receptor.

3nkr 〈PDB，東北大学資料〉 [オートタキシン（ATX） / Gタンパク質共役受容体（GPCR）]
Crystal structure of mouse autotaxin in complex with 22:6-LPA.

1nn2* ‖ 参考：PQSによる四量体 〈PDB，Molecule of the Month〉 [A型インフルエンザウイルス（1967年 東京） / ノイラミニダーゼ]
THREE-DIMENSIONAL STRUCTURE OF THE NEURAMINIDASE OF INFLUENZA VIRUS A(SLASH)TOKYO(SLASH)3(SLASH)67 AT 2.2Å RESOLUTION.

2nntのModel 1 〈PDB〉 [アミロイドプロトフィラメント]
General structural motifs of amyloid protofilaments.

1noo# 〈PDB〉 [P450 / ショウノウ]
Cytochrome P450Cam Complexed With 5-Exo-Hydroxycamphor.

1npo ｜ Chain B 〈PDB〉 [オキシトシン（B・D鎖）は分娩促進ホルモン]
Bovine Neurophysin II Complex With Oxytocin.

3nsb 〈PDB〉 [バクテリオロドプシン / X線損傷]
Structure of bacteriorhodopsin ground state before and after X-ray modification.

1nta 〈PDB〉 [RNAアプタマー / ストレプトマイシン]
2.9 Å crystal structure of Streptomycin RNA-aptamer.

2ntbのChain A* 〈PDB〉 [ペクチンメチルエステラーゼ]
Crystal structure of pectin methylesterase in complex with hexasaccharide V.

1nthの6量体（Chain A×6）##（BGXは座標2種のうちAのみ） 〈PDB〉 [メタン菌 / 古細菌 / メチルトランスフェラーゼ]
Crystal structure of the methanosarcina barkeri monomethylamine methyltransferase (MTMB).

1nu3のChain A 〈PDB〉
Limonene-1,2-Epoxide Hydrolase In Complex With Valpromide.

2nu5 〈PDB〉 [griffithsin]
Crystal structure of a complex of griffithsin cocrystallized with N-acetylglucosamine.

2nuf 〈PDB〉 [リボヌクレアーゼ / 二本鎖RNA（ds-RNA）]
Crystal structure of RNase III from Aquifex aeolicus complexed with ds-RNA at 2.5-Angstrom Resolution.

2nvl* 〈PDB〉 [抗酸化タンパク質ペルオキシレドキシン（産総研資料）]　 Cys42，His50選択
Crystal structure of archaeal peroxiredoxin, thioredoxin peroxidase from Aeropyrum pernix K1 (sulfonic acid form).

1nvs 〈資料，PDB〉
The Complex Structure Of Checkpoint Kinase Chk1/Sb218078.

1nwpのChain A ｜ (SITE)（SITE記載なし；ノーベル化学賞情報から選択） 〈資料，PDB〉 [ブルー銅タンパク質アズリン / 1992年ノーベル化学賞]　 不要結合削除
Crystallographic Study Of Azurin From Pseudomonas Putida.

1nwyのChain C・Q・Zα炭素のみ 〈PDB5.23MB〉 [アジスロマイシン]
Complex Of The Large Ribosomal Subunit From Deinococcus Radiodurans With Azithromycin.

2nxy 〈PDB〉 [HIV-1 / gp120 / CD4]
HIV-1 gp120 Envelope Glycoprotein(S334A) Complexed with CD4 and Antibody 17b.

2o0z 〈PDB〉 [結核菌 / 3-ホスホシキミ酸1-カルボキシビニルトランスフェラーゼ（シキミ酸経路酵素）]
Mycobacterium tuberculosis epsp synthase in complex with product (EPS).

2o17 〈PDB〉 [ペクチン酸リアーゼ]
Pectate lyase bound to hexasaccharide.

2o4p 〈PDB〉 [HIV-1 / チプラナビル]
Crystal Structure of HIV-1 Protease (Q7K) in Complex with Tipranavir.

2o2l 〈PDB〉 [エンテロトキシンB / ABO式血液型抗原]
Crystal structure analysis of the human heat-labile enterotoxin B-subunit in complex with an ABO blood group antigen.

3o5cのChain C 〈PDB〉 [シトクロムcペルオキシダーゼ]
Cytochrome c Peroxidase BccP of Shewanella oneidensis.

2o5w* 〈PDB〉 [ピロリン酸加水分解酵素 / Sm（サマリウム）]
Structure of the E. coli dihydroneopterin triphosphate pyrophosphohydrolase in complex with Sm+3 and pyrophosphate.

1o6k 〈PDB〉
Structure Of Activated Form Of Pkb Kinase Domain S474D With Gsk3 Peptide and Amp-Pnp.

2o7i 〈PDB〉 [セロビオース]
The X-ray crystal structure of a thermophilic cellobiose binding protein bound with cellobiose.

1o7mのChain A*　 Fe-O₂のSITE（Asn201，His208，His213，Asp362）選択 〈資料，PDB〉
NAPHTHALENE 1,2-DIOXYGENASE, BINARY COMPLEX WITH DIOXYGEN.

1o7n 〈PDB〉 [ナフタレン 1,2-ジオキシゲナーゼ / インドール]
NAPHTHALENE 1,2-DIOXYGENASE, TERNARY COMPLEX WITH DIOXYGEN AND INDOLE.

1o83のChain B・D* 〈PDB〉 [Peptide Antibiotic]
Crystal Structure Of Bacteriocin As-48 At pH 7.5, Phosphate Bound. Crystal Form I.

1o7tのChain A・D・G 〈PDB〉 [鉄結合タンパク質 / ハフニウム（Hf）]
METAL NANOCLUSTERS BOUND TO THE FERRIC BINDING PROTEIN FROM NEISSERIA GONORRHOEAE.

2o93 〈PDB〉 [HIV-1 LTR / エンハンサーエレメント（遺伝子転写促進配列）]
Crystal structure of NFAT bound to the HIV-1 LTR tandem kappaB enhancer element.

2o9e 〈PDB〉 [アクアポリンZ / 水銀イオン]
Crystal Structure of AqpZ mutant T183C complexed with mercury.

2oau 〈PDB，Molecule of the Month，今月の分子〉 [機械受容チャネル（閉構造；開構造は2vv5）]
Mechanosensitive Channel of Small Conductance (MscS).

2occのChain A 〈資料，PDB〉 [1-187]
Bovine Heart Cytochrome C Oxidase At The Fully Oxidized State.

1oclのChain A*# ｜ SITE 〈PDB〉
The Crystal Structure Of Malonamidase E2 Complexed With Malonate From Bradyrhizobium Japonicum.

1odvのChain A 〈PDB〉 [PYP]
PHOTOACTIVE YELLOW PROTEIN 1-25 DELETION MUTANT.

1oed 〈PDB，eProtS〉 [アセチルコリン受容体]
Structure Of Acetylcholine Receptor Pore From Electron Images.

1og5のChain A*# ｜ SITE-1(HEC) ｜ SITE-2(SWF)*#〈PDB〉
Structure Of Human Cytochrome P450 Cyp2C9.

3og7 〈PDB，Nature Highlight〉 [B-Rafプロテインキナーゼ / 阻害剤ベムラフェニブ]
B-Raf Kinase V600E oncogenic mutant in complex with PLX4032.

1ogpのChain A・B 〈PDB〉 [亜硫酸オキシダーゼ]
THE CRYSTAL STRUCTURE OF PLANT SULFITE OXIDASE PROVIDES INSIGHT INTO SULFITE OXIDATION IN PLANTS AND ANIMALS.

2ogx 〈PDB〉 [Wイオン / 窒素固定菌のMo貯蔵タンパク質]
The crystal structure of the molybdenum storage protein from Azotobacter vinelandii loaded with polyoxotungstates (WSto).

1ohmのModel 1 〈PDB〉
Sakacin P Variant That Is Structurally Stabilized By An Inserted C-Terminal Disulfide Bridge.

1ohr ｜ (SITE)（酵素活性中心Asp25・Asp25'選択） 〈資料，PDB〉 [抗HIV薬メシル酸ネルフィナビル / 10-238]
Viracept (R) (Nelfinavir Mesylate, Ag1343): A Potent Orally Bioavailable Inhibitor Of HIV-1 Protease.

1oigのModel 1 〈PDB〉 [ショウジョウバエの表皮クチクラ]
THE SOLUTION STRUCTURE OF THE DPY MODULE FROM THE DUMPY PROTEIN.

2oin 〈PDB〉 [C型肝炎ウイルス]
crystal structure of HCV NS3-4A R155K muntant.

2oiy 〈PDB〉 [HIV-1 / RNA]
Crystal structure of the duplex form of the HIV-1(LAI) RNA dimerization initiation site.

3ok9##（GRL-0519Aは座標2種のうちAのみ） 〈PDB〉 [HIV-1プロテアーゼ阻害剤GRL-0519A]
Crystal structure of wild-type HIV-1 protease with new oxatricyclic designed inhibitor GRL-0519A.

2okj 〈PDB〉 [グルタミン酸脱炭酸酵素（GAD） / GABA]　 GABA選択
The X-ray crystal structure of the 67kDa isoform of Glutamic Acid Decarboxylase (GAD67).

1ol7* ｜ SITE 〈PDB〉
Structure Of Human Aurora-A 122-403 Phosphorylated On Thr287, Thr288.

2olcのChain A 〈PDB〉 [Ho原子]
Crystal structure of 5-methylthioribose kinase in complex with ADP-2Ho.

2om2のChain A・B 〈PDB〉 [Gタンパク質Gαi1（Chain A） / RGS14（Chain B）]
Crystal Structure Of Human G[alpha]i1 Bound To The Goloco Motif Of Rgs14.

1om4 〈PDB，今月の分子〉 [神経性一酸化窒素合成酵素]
STRUCTURE OF RAT NEURONAL NOS HEME DOMAIN WITH L-ARGININE BOUND.

1omy* 〈PDB〉 [サソリαトキシン]
Crystal Structure of a Recombinant alpha-insect Toxin BmKaIT1 from the scorpion Buthus martensii Karsch.

2onj 〈PDB，Molecule of the Month，今月の分子〉 [多剤排出トランスポーター，黄色ブドウ球菌]
Structure of the multidrug ABC transporter Sav1866 from S. aureus in complex with AMP-PNP.

1op5 ｜ Chain Aの糖鎖のみ（Man9GlcNAc2） 〈PDB〉 [抗体2G12]
Crystal Structure Of Fab 2G12 Bound To Man9Glcnac2.

2oomのModel 1 〈PDB〉 [HIV-1 / LNA/RNAアプタマー]
NMR structure of a kissing complex formed between the TAR RNA element of HIV-1 and a LNA/RNA aptamer.

1opnのChain A　 第2細胞外ドメインECL2（Gly163〜Lys191）選択 〈PDB〉 [HIV / CCR5（theoretical model）]
THEORETICAL MODEL OF CCR5 RECEPTOR IN COMPLEX WITH HIV GP120 ENVELOPE GLYCOPROTEIN AND CD4 RECEPTOR.

2opp* 〈PDB〉 [HIV-1 / 非核酸系逆転写酵素阻害剤 GW420867X]
Crystal Structure of HIV-1 Reverse Transcriptase in Complex with GW420867X.

2or1のChain A・B・L 〈PDB〉 [4-52]
Recognition of a DNA operator by the repressor of phage 434: a view at high resolution.

3os1の10量体（Chain ABCDT×2） 〈PDB，今月の分子〉 [インテグラーゼ / プロトタイプ泡沫状ウイルス（PFV） / DNA]
PFV target capture complex (TCC) at 2.97Å resolution.

3os3* 〈PDB〉 [MAPキナーゼキナーゼ1 / MEK阻害剤CH4858061]
Mitogen-activated protein kinase kinase 1 (MEK1) in complex with CH4858061 and MgATP.

2os5* 〈PDB〉 [マクロファージ遊走阻止因子 / サイトカイン]
Macrophage migration inhibitory factor from Ancylostoma ceylanicum.

2oslのChain A・B・Q 〈PDB〉 [リツキシマブ（商品名リツキサン） / エピトープペプチド]
Crystal structure of Rituximab Fab in complex with an epitope peptide.

3oswのChain A 〈PDB〉 [ペルオキシソーム増殖剤活性化受容体γ / テトラブロモビスフェノールA（TBBPA）]
Crystal structure of PPARgamma ligand binding domain in complex with tetrabromo-bisphenol A (TBBPA).

1otrのModel 1 〈資料，PDB〉 [ユビキチン]
Solution Structure Of A Cue-Ubiquitin Complex.

2oty##（1,2-ジクロロベンゼンは座標2種のうちAのみ） 〈PDB〉 [リゾチーム / 1,2-ジクロロベンゼン]
1,2-dichlorobenzene in complex with T4 Lysozyme L99A.

2oua 〈PDB〉 [ナパーゼ（NAPase）]
Crystal Structure of Nocardiopsis Protease (NAPase).

1ow0 〈PDB〉 [FcaRI / IgA1-Fc]
Crystal structure of human FcaRI bound to IgA1-Fc.

1owtのModel 1 〈PDB，Molecule of the Month〉 [アルツハイマー病 / アミロイド前駆体タンパク質]
Structure of the Alzheimer's disease amyloid precursor protein copper binding domain.

1oxr 〈PDB〉 [ホスホリパーゼA2 / アセチルサリチル酸（アスピリン）]
Aspirin induces its Anti-inflammatory effects through its specific binding to Phospholipase A2: Crystal structure of the complex formed between Phospholipase A2 and Aspirin at 1.9Å resolution.

2oye* 〈PDB〉 [シクロオキシゲナーゼ-1（COX-1）]
Indomethacin-(R)-alpha-ethyl-ethanolamide bound to Cyclooxygenase-1.

2oyyのChain C-H 〈PDB〉 [HTHP / ヘムタンパク質]
HTHP: a hexameric tyrosine-coordinated heme protein.

2p1p 〈PDB，Molecule of the Month，今月の分子〉 [オーキシン / TIR1ユビキチンリガーゼ]
Mechanism of Auxin Perception by the TIR1 ubiquitin ligase.

5p21 〈PDB，今月の分子〉 [Rasタンパク質 / がん]
REFINED CRYSTAL STRUCTURE OF THE TRIPHOSPHATE CONFORMATION OF H-RAS P21 AT 1.35 ANGSTROMS RESOLUTION: IMPLICATIONS FOR THE MECHANISM OF GTP HYDROLYSIS.

2p3a##（CME・3TLは座標2種のうちAのみ） 〈PDB〉 [HIVプロテアーゼ阻害剤TL-3 / 多剤耐性]
Crystal Structure of the multi-drug resistant mutant subtype B HIV protease complexed with TL-3 inhibitor.

2p4n 〈PDB，Molecule of the Month〉 [キネシン / チューブリン / パクリタキセル（タキソール）]
Human Monomeric Kinesin (1BG2) and Bovine Tubulin (1JFF) Docked into the 9-Angstrom Cryo-EM Map of Nucleotide-Free Kinesin Complexed to the Microtubule.

2p54 〈PDB〉 [PPAR（ペルオキシソーム増殖剤活性化受容体）-α（Chain A）]
a crystal structure of PPAR alpha bound with SRC1 peptide and GW735.

2p70* 〈PDB〉 [フェロモン結合タンパク質（カイコ）]
Bombyx mori pheromone binding protein bound to bell pepper odorant.

2p7g 〈PDB〉 [エストロゲン関連受容体γ / ビスフェノールA]
X-ray Structure of Estrogen Related Receptor g in complex with Bisphenol A.

2p85のChain A##（indoleは座標2種のうちAのみ） 〈PDB〉 [P450 2A13 / インドール]
Structure of Human Lung Cytochrome P450 2A13 with indole bound in two alternate conformations.

1p8dのChain A・C 〈PDB〉
X-Ray Crystal Structure Of Lxr Ligand Binding Domain With 24(S),25-Epoxycholesterol.

1p9sのChain A ｜ Chain B 〈PDB〉 [SARS]
Coronavirus Main Proteinase (3Clpro) Structure: Basis For Design Of Anti-Sars Drugs.

3pe4のChain A・B 〈PDB，今月の分子〉 [O-GlcNAc転移酵素]
Structure of human O-GlcNAc transferase and its complex with a peptide substrate.

1pa5 〈PDB；Z形式圧縮ファイル〉 [SARSコロナウイルス（Theoretical Model）]
STRUCTURE OF SARS CORONAVIRUS PROTEINASE. → 参考：OCA Atlas for 1PA5，SARSと抗ウイルス薬

1pagのChain A 〈資料，PDB〉
The 2.5Å structure of pokeweed antiviral protein.

5pah 〈PDB〉 [ドーパミン]
Human Phenylalanine Hydroxylase Catalytic Domain Dimer With Bound Dopamine Inhibitor.

9pap 〈PDB，モノー「偶然と必然」p.218〉 [パパイン]
STRUCTURE OF PAPAIN REFINED AT 1.65 ANGSTROMS RESOLUTION.

3pbaのChain A 〈PDB〉 [ペルオキシソーム増殖剤活性化受容体γ / テトラブロモビスフェノールA一硫酸塩（monoTBBPA）]
Crystal structure of PPARgamma ligand binding domain in complex with monosulfate tetrabromo-bisphenol A (MonoTBBPA).

1pbk 〈PDB〉 [ラパマイシン]
Homologous Domain Of Human Fkbp25.

1pboのChain A 〈PDB〉
Complex Of Bovine Odorant Binding Protein (Obp) With A Selenium Containing Odorant.

3pcq | 36量体（Chain A-M・X×3）α炭素のみ 〈PDB，Nature Highlight〉 [LCLS / 好熱性シアノバクテリアBP-1 / 光合成光化学系I]
Femtosecond X-ray protein Nanocrystallography.

3pcvの3量体（Chain A×3） 〈PDB〉 [ロイコトリエンC₄合成酵素（理研）]　 グルタチオン選択
Crystal structure analysis of human leukotriene C4 synthase at 1.9Å resolution.

1pdlα炭素のみ 〈PDB〉 [T4ファージ / 13-150]
Fitting Of Gp5 In The Cryoem Reconstruction Of The Bacteriophage T4 Baseplate.

2pe4 〈PDB〉 [ヒアルロニダーゼ-1]
Structure of Human Hyaluronidase 1, a Hyaluronan Hydrolyzing Enzyme Involved in Tumor Growth and Angiogenesis.

2ped 〈PDB〉 [9-cis-ロドプシン]
Crystallographic model of 9-cis-rhodopsin.

2per* 〈PDB〉 [細胞内塩素イオンチャネル（CLIC）]
Crystal Structure of Human Chloride Intracellular Channel protein 2.

2pgz 〈PDB〉 [コカイン / アセチルコリン結合性タンパク質]　 コカイン選択
Crystal structure of Cocaine bound to an ACh-Binding Protein.

2ph9##（ガランタミンGNTは座標2種のうちAのみ） 〈PDB〉 [アセチルコリンレセプター / ガランタミン]
Galanthamine bound to an ACh-binding Protein.

1pha 〈PDB〉 [P450 / ショウノウ]
Inhibitor-induced conformational change in cytochrome P-450CAM.

1phb# 〈PDB〉 [P450 / ショウノウ]
Inhibitor-induced conformational change in cytochrome P-450CAM.

1pho 〈PDB，PDBj〉 [βバレル，ホスホポリンE]
CRYSTAL STRUCTURES EXPLAIN FUNCTIONAL PROPERTIES OF TWO E. COLI PORINS.

2phw 〈PDB〉 [マメ科レクチン]
Pterocarpus angolensis lectin (PAL) in complex with Man-9.

3pjr 〈PDB〉 [参考]
Helicase Substrate Complex.

1pk2 〈PDB〉 [t-PA（組織プラスミノゲンアクチベーター） / 脳梗塞治療薬]
SOLUTION STRUCTURE OF THE TISSUE-TYPE PLASMINOGEN ACTIVATOR KRINGLE 2 DOMAIN COMPLEXED TO 6-AMINOHEXANOIC ACID AN ANTIFIBRINOLYTIC DRUG.

2pk4*# ｜ SITE 〈PDB〉
The refined structure of the ε-aminocaproic acid complex of human plasminogen kringle 4.

2pk5##（KNI-10075は座標2種のうちAのみ） 〈PDB〉 [HIVプロテアーゼ阻害剤KNI-10075]
Crystal Structure of HIV-1 Protease (Q7K, L33I, L63I ) in Complex with KNI-10075.

2pk6##（KNI-10033は座標2種のうちAのみ） 〈PDB〉 [HIVプロテアーゼ阻害剤KNI-10033]
Crystal Structure of HIV-1 Protease (Q7K, L33I, L63I) in Complex with KNI-10033.

1pkv* 〈PDB〉 [リボフラビン（ビタミンB₂）]
The N-terminal domain of riboflavin synthase in complex with riboflavin.

3pmq 〈PDB〉 [外膜デカヘムシトクロームc MtrF]
Crystal structure of the outer membrane decaheme cytochrome MtrF.

2pnc 〈PDB〉 [アミンオキシダーゼ / クロニジン]
Crystal Structure of Bovine Plasma Copper-Containing Amine Oxidase in Complex with Clonidine.

2pne 〈PDB，今月の分子〉 [不凍タンパク質]
Crystal Structure of the Snow Flea Antifreeze Protein.

1pnn* 〈PDB〉 [ペプチド核酸（PNA）]
PEPTIDE NUCLEIC ACID (PNA) COMPLEXED WITH DNA.

2pnoのChain A-F 〈PDB〉 [ロイコトリエンC₄合成酵素（理研）]　 グルタチオン選択
Crystal structure of human leukotriene C4 synthase .

1pnvのChain B 〈PDB〉 [グリコペプチド系抗生物質／バンコマイシン]
Crystal Structure Of Tdp-Epi-Vancosaminyltransferase Gtfa In Complexes With Tdp and Vancomycin.

3po7のChain A 〈PDB〉 [モノアミンオキシダーゼB / ゾニサミド（抗てんかん薬・パーキンソン病治療薬）]
Human monoamine oxidase B in complex with zonisamide.

1ppi 〈PDB，Molecule of the Month〉 [α-アミラーゼ]
The active center of a mammalian α-amylase. Structure of the complex of a pancreatic -amylase with a carbohydrate inhibitor refined to 2.2-Å resolution.

1pprのChain M* 〈PDB〉
Peridinin-Chlorophyll-Protein Of Amphidinium Carterae.

3pqr* 〈PDB，Nature ハイライト〉 [ロドプシン]
Crystal structure of Metarhodopsin II in complex with a C-terminal peptide derived from the Galpha subunit of transducin.

2pr6 〈PDB〉 [フラボタンパク質 / 光受容体]
Structural Basis for Light-dependent Signaling in the Dimeric LOV Photosensor YtvA (Light Structure).

5prc 〈PDB〉 [光合成反応中心 / アトラジン]
PHOTOSYNTHETIC REACTION CENTER FROM RHODOPSEUDOMONAS VIRIDIS (ATRAZINE COMPLEX).

2prgのChain A ｜ SITE 〈PDB〉
Ligand-Binding Domain Of The Human Peroxisome Proliferator Activated Receptor Gamma.

4prgのChain A 〈PDB〉
0072 Partial Agonist Ppar γ Cocrystal.

1prhのChain A 〈PDB〉
The X-ray crystal structure of the membrane protein prostaglandin H2 synthase-1.

1psdのChain A ｜ SITE 〈PDB〉
The allosteric ligand site in the Vmax-type cooperative enzyme phosphoglycerate dehydrogenase.

1psrのChain A 〈資料，PDB〉
Human Psoriasin (S100A7).

2psu 〈PDB〉 [HIVプロテアーゼ阻害剤]
Crystal Structure of wild type HIV-1 protease in complex with CARB-AD37.

2psv 〈PDB〉 [HIVプロテアーゼ阻害剤]
Crystal Structure of wild type HIV-1 protease in complex with CARB-KB45.

3pt6のChain A・C・I* 〈PDB，今月の分子〉 [DNAメチラーゼ（DNAメチル化酵素） / DNMT1 / DNA]
Crystal structure of mouse DNMT1(650-1602) in complex with DNA.

1pth 〈PDB〉
The structural basis of aspirin activity inferred from the crystal structure of inactivated prostaglandin H2 synthase.

1pv7のChain A 〈PDB〉 [ラクトーストランスポーター / LacY]
Crystal structure of lactose permease with TDG.

1pw1 〈PDB〉 [D-アラニル-D-アラニンカルボキシペプチダーゼ / ホルムアルデヒド（炭素原子のみ）]
Non-Covalent Complex Of Streptomyces R61 DD-Peptidase With A Highly Specific Penicillin.

1pwc 〈PDB，Molecule of the Month〉 [ペニシリンG / D-アラニル-D-アラニンペプチダーゼ]
penicilloyl acyl enzyme complex of the Streptomyces R61 DD-peptidase with penicillin G.

2px1 〈PDB〉 [ラクトフェリン / ラクトトランスフェリン]
crystal structure of the complex of bovine lactoferrin C-lobe with Ribose at 2.5Å resolution.

1pxzのChain A 〈PDB〉 [スギ花粉 / アレルゲン]
1.7 Å Crystal Structure of jun a 1, the major allergen from cedar pollen.

3py4 〈PDB〉 [ラクトペルオキシダーゼ / アセトアミノフェン]
Crystal structure of bovine lactoperoxidase in complex with paracetamol at 2.4Å resolution.

2pym 〈PDB〉 [HIV-1 / ネルフィナビル]
HIV-1 PR mutant in complex with nelfinavir.

1q0wのModel 1 〈資料，PDB〉 [ユビキチン]
Solution Structure Of Vps27 Amino-Terminal Uim-Ubiquitin Complex.

1q0y 〈PDB〉 [抗モルヒネ抗体 / モルフィン（モルヒネ）]
Anti-Morphine Antibody 9B1 Complexed with Morphine.

1q2jのModel 1 〈PDB〉
Structural Basis For Tetrodotoxin-Resistant Sodium Channel Binding By Mu-Conotoxin Smiiia.

1q2wのChain A ｜ Chain B 〈PDB〉 [SARSコロナウイルス]
X-Ray Crystal Structure Of The Sars Coronavirus Main Protease. → 参考：SARSと抗ウイルス薬

1q47のChain A 〈PDB〉 [セマフォリン]
Structure of the Semaphorin 3A Receptor-Binding Module.

1q4g##（HEMは座標2種のうちAのみ） 〈PDB〉 [プロスタグランジンH2シンターゼ]
2.0 Å Crystal Structure of Ovine Prostaglandin H2 Synthase-1, in complex with alpha-methyl-4-biphenylacetic acid.

2q4g 〈PDB〉 [リボヌクレアーゼ / リボヌクレアーゼ阻害剤]
Ensemble refinement of the protein crystal structure of human ribonuclease inhibitor complexed with ribonuclease I.

2q5t 〈PDB〉 [コレラ菌]
Identification, Characterization and Structure of Cholix toxin from Vibrio cholerae.

1q5wのModel 1 〈資料，PDB〉 [ユビキチン / Zinc Finger]
Ubiquitin Recognition By Npl4 Zinc-Fingers.

2q66 〈PDB，Molecule of the Month，今月の分子〉 [ポリAポリメラーゼ]
Structure of Yeast Poly(A) Polymerase with ATP and oligo(A).

2q6nのChain A 〈PDB〉 [P450 2B4]
Structure of Cytochrome P450 2B4 with Bound 1-(4-cholorophenyl)imidazole.

3q6xのChain A 〈PDB〉 [耐性菌 / NDM-1 / 加水分解アンピシリン]
Crystal structure of NDM-1 in complex with hydrolyzed ampicillin.

1q72 〈PDB〉 [コカイン]
Anti-Cocaine Antibody M82G2 Complexed with Cocaine.

2q7j 〈PDB〉 [アンドロゲン受容体 / テストステロン / 核内受容体共役因子]
The Wild Type Androgen Receptor Ligand Binding Domain Bound with Testosterone and a TIF2 box 3 Coactivator Peptide 740-753.

2q7n 〈PDB〉 [白血病抑制因子 / サイトカイン受容体]
Crystal structure of Leukemia inhibitory factor in complex with LIF receptor (domains 1-5).

1q84 〈PDB〉 [アセチルコリンエステラーゼ]
Crystal structure of the mouse acetylcholinesterase-TZ2PA6 anti complex.

2q8i* 〈PDB〉 [制がん剤（HSP90阻害剤）ラディシコール]
Pyruvate dehydrogenase kinase isoform 3 in complex with antitumor drug radicicol.

2q9f 〈PDB〉 [P450 46A1]
Crystal structure of human cytochrome P450 46A1 in complex with cholesterol-3-sulphate.

2qad 〈PDB〉 [HIV-1 / gp120 / CD4 / CCR5 / 抗体412d]　 スルホチロシン（Tys）選択
Structure of tyrosine-sulfated 412d antibody complexed with HIV-1 YU2 gp120 and CD4.

1qap* 〈PDB〉 [QPRT / キノリン酸ホスホリボシルトランスフェラーゼ]
QUINOLINIC ACID PHOSPHORIBOSYLTRANSFERASE WITH BOUND QUINOLINIC ACID.

1qb0 〈資料，PDB〉
Human Cdc25B Catalytic Domain.

2qbm 〈PDB〉 [P450 / ショウノウ / CNイオン]
Crystal structure of the P450cam G248T mutant in the cyanide bound state.

2qci##（A鎖Arg8ほか，B鎖Lys107ほか，GRL-98065は座標2種のうちAのみ） 〈PDB〉 [HIVプロテアーゼ阻害剤 / GRL-98065]
HIV-1 Protease mutant D30N with potent Antiviral inhibitor GRL-98065.

1qd0* 〈PDB〉 [反応染料 RR6]
Camelid Heavy Chain Variable Domains Provide Efficient Combining Sites To Haptens.

1qd5* 〈PDB〉 [OMPLA]
Outer Membrane Phospholipase A From Escherichia Coli.

2qdz 〈PDB〉 [膜タンパク質FhaC / Omp85-TpsB]
Structure of the membrane protein fhac: a member of the omp85/tpsb transporter family.

2qei 〈PDB〉 [クロミプラミン（三環系抗うつ薬）]
Crystal structure analysis of LeuT complexed with L-alanine, sodium, and clomipramine.

2qej* 〈PDB〉 [黄色ブドウ球菌 / IgA1]
Crystal structure of a Staphylococcus aureus protein (SSL7) in complex with Fc of human IgA1.

1qexのChain A 〈PDB〉 [T4ファージ]
Bacteriophage T4 Gene Product 9 (Gp9), The Trigger Of Tail Contraction and The Long Tail Fibers Connector.

2qfj* 〈PDB〉 [FIR（FBP Interacting Repressor，c-myc遺伝子転写抑制因子），一本鎖DNA（ssDNA）]
Crystal Structure of First Two RRM Domains of FIR Bound to ssDNA from a Portion of FUSE.

1qfoのChain A 〈PDB〉 [3'-シアリルラクトース / 15-167]
N-Terminal Domain Of Sialoadhesin (Mouse) In Complex With 3'Sialyllactose.

1qfu* 〈PDB，Molecule of the Month〉 [ヘマグルチニン / 抗体]
INFLUENZA VIRUS HEMAGGLUTININ COMPLEXED WITH A NEUTRALIZING ANTIBODY.

1qgi 〈PDB〉 [キトサナーゼ]
CHITOSANASE FROM BACILLUS CIRCULANS.

1qgk* 〈PDB，Molecule of the Month，今月の分子〉 [インポーチン（核輸送に関与するタンパク質）]
STRUCTURE OF IMPORTIN BETA BOUND TO THE IBB DOMAIN OF IMPORTIN ALPHA.

1qi9 〈PDB〉 [ブロモペルオキシダーゼ]
X-RAY SIRAS STRUCTURE DETERMINATION OF A VANADIUM-DEPENDENT HALOPEROXIDASE FROM ASCOPHYLLUM NODOSUM AT 2.0 Å RESOLUTION.

2qiq 〈PDB〉 [SARS]
Structure-based Design and Synthesis and Biological Evaluation of Peptidomimetic SARS-3CLpro Inhibitors.

1qj9* 〈PDB〉 [βバレル，外膜タンパク質OmpX]
CRYSTAL STRUCTURE OF THE OUTER MEMBRANE PROTEIN OMPX FROM ESCHERICHIA COLI.

1qjq 〈PDB〉
FERRIC HYDROXAMATE RECEPTOR FROM ESCHERICHIA COLI (FHUA).

2qjr 〈PDB〉 [ジペプチジルペプチダーゼIV]
dipepdyl peptidase IV in complex with inhibitor PZF.

2qkh 〈PDB〉 [胃抑制ペプチド（胃酸分泌抑制ホルモン, GIP） / メチル-β-シクロデキストリン]
Crystal structure of the extracellular domain of human GIP receptor in complex with the hormone GIP.

1qkm 〈PDB〉 [ゲニスタイン]
Human Oestrogen Receptor β Ligand-Binding Domain In Complex With Partial Agonist Genistein.

1qkuのChain A ｜ SITE 〈PDB〉 [8-2]
Wild Type Estrogen Nuclear Receptor Ligand Binding Domain Complexed With Estradiol.

1qlzのModel 1 〈資料１・２・３，PDB〉
Human Prion Protein.

1qm2 〈資料１・２，PDB〉
Human Prion Protein Fragment 121-230.

2qmi 〈PDB〉 [ペニシリン結合タンパク質ホモログ / パイロコッカス・アビシ / Lu]
Structure of the octameric penicillin-binding protein homologue from Pyrococcus abyssi.

1qmq* ｜ SITE* 〈PDB〉　 不要結合削除
Optical Detection Of Cytochrome P450 By Sensitizer-Linked Substrates.

2qnn*##（阻害剤QN1は座標2種のうちAのみ） 〈PDB〉 [HIV-1プロテアーゼ阻害剤 / ピロリジン誘導体]
HIV-1 protease in complex with a multiple decorated pyrrolidine-based inhibitor.

1qnu*〈PDB〉 [志賀毒素様毒素 / O157]
Shiga-Like Toxin I B Subunit Complexed With The Bridged-Starfish Inhibitor.

1qo1α炭素のみ 〈PDB〉 [ATP合成酵素 / パン酵母ミトコンドリア]
MOLECULAR ARCHITECTURE OF THE ROTARY MOTOR IN ATP SYNTHASE FROM YEAST MITOCHONDRIA.

2qpk 〈PDB〉 [ラクトペルオキシダーゼ]
Crystal structure of the complex of bovine lactoperoxidase with salicylhydroxamic acid at 2.34 Å resolution.

2qppのChain A* 〈PDB〉 [ヘムオキシゲナーゼ]
Crystal structure of human heme oxygenase-2 C127A (HO-2) with bound heme.

2qqm 〈PDB〉 [ニューロピリン-1]
Crystal Structure of the a2b1b2 Domains from Human Neuropilin-1.

2qqu* 〈PDB〉 [細胞壁インベルターゼ]
Crystal structure of a cell-wall invertase (D239A) from Arabidopsis thaliana in complex with sucrose.

1qqwのChain A 〈PDB〉 [カタラーゼ]
Crystal Structure Of Human Erythrocyte Catalase.

2qrb 〈PDB〉 [ラクトペルオキシダーゼ]
Crystal structure of chloride saturated bovine lactoperoxidase at 2.5 Å resolution shows multiple halide binding sites.

1qrj 〈PDB〉 [HTLV-1]
SOLUTION STRUCTURE OF HTLV-I CAPSID PROTEIN.

1qs4のChain A　 D64,D116,E152,K156,K159選択（Web資料参照） 〈PDB〉 [HIVインテグラーゼ阻害剤 / 5ClTEP]
Core Domain Of HIV-1 Integrase Comlexed With Mg++ and 1-(5- Chloroindol-3-Yl)-3-Hydroxy-3-(2H-Tetrazol-5-Yl)-Propenone.

2qsc* 〈PDB〉 [抗HIV-1抗体 / gp120]
Crystal structure analysis of anti-HIV-1 V3-Fab F425-B4e8 in complex with a V3-peptide.

2qsg 〈PDB〉 [UVによるDNA損傷 / cyclobutane pyrimidine dimer（CPD） / C群色素性乾皮症（XPC） / ヌクレオチド除去修復（NER）]
Crystal structure of Rad4-Rad23 bound to a UV-damaged DNA.

1qtj（アミノ酸区別不可） ‖ 〈PDB〉 [血清アミロイドP成分 / アメリカカブトガニ]
CRYSTAL STRUCTURE OF LIMULUS POLYPHEMUS SAP.

2qwk ‖ 参考：PQSによる四量体 ‖ CASTpによるGS4071近傍Pocket： ID54　 ID53　 ID53+54　 ID53+54から目視で選んだ仮SITE　 同仮SITE選択 〈PDB〉 [GS4071（オセルタミビルが変化）が結合したインフルエンザウイルスのノイラミニダーゼ]
The X-Ray Structure Of A Complex Of 5-N-Acetyl-5-Amino-3- (1-Ethylpropoxy)-1-Cyclohexene-1-Carboxylic Acid (Gs4071) and Wildtype Tern N9 Influenza Virus Neuraminidase.

2qxl 〈PDB〉 [Hsp110 / Hsp70]
Crystal Structure Analysis of Sse1, a yeast Hsp110.

1qzr## 〈PDB〉 [DNAトポイソメラーゼ / ICRF-187]　
Crystal Structure Of The ATPase Region Of Saccharomyces Cerevisiae Topoisomerase II Bound To Icrf-187 (Dexrazoxane).

2qzv 〈PDB〉 [ボルト（ヴォールト）タンパク質]
Draft Crystal Structure of the Vault Shell at 9Å Resolution.

1r13* ‖ 参考：PQSによる三量体* 〈PDB〉 [肺サーファクタント]
Carbohydrate recognition and neck domains of surfactant protein A (SP-A).

1r1h 〈PDB〉 [βアミロイド分解酵素ネプリライシン]
STRUCTURAL ANALYSIS OF NEPRILYSIN WITH VARIOUS SPECIFIC AND POTENT INHIBITORS.

3r1mの8量体（Chain A×8）α炭素のみ 〈PDB，東京大学プレスリリース〉 [FBPアルドラーゼ／ホスファターゼ / アルドラーゼ状態（ホスファターゼ状態は1umg）]
Strucure of bifunctional fructose 1,6-bisphosphate aldolase/phosphatase (aldolase form).

1r2nのModel 1* 〈PDB〉 [レチナール]
NMR Structure Of The All-Trans Retinal In Dark-Adapted Bacteriorhodopsin.

1r31のChain A 〈PDB〉 [HMG-CoAレダクターゼ]
HMG-CoA reductase from Pseudomonas mevalonii complexed with HMG-CoA.

2r4g 〈PDB〉 [テロメラーゼ / テトラヒメナ・サーモフィラ]
The high resolution structure of the RNA-binding domain of telomerase.

2r53* 〈PDB〉 [サイトカイン / 骨形成タンパク質]
Crystal structure analysis of Bone Morphogenetic Protein-6 variant B2 (B2-BMP-6).

1r5sのModel 1 〈PDB〉 [コネキシン]
Connexin 43 Carboxyl Terminal Domain.

2r61* 〈PDB〉 [外毒素 / シアリルルイスX]
Crystal structure of the Staphylococcal superantigen-like protein SSL5 in complex with sialyl-Lewis X at pH 7.4.

1r6zのChain P 〈PDB〉 [アルゴノート2]
The Crystal Structure Of The Argonaute2 Paz Domain (As A Mbp Fusion).

2r7e 〈PDB〉 [凝固第VIII因子]
Crystal Structure Analysis of Coagulation Factor VIII.

1r8j 〈PDB，Molecule of the Month，今月の分子〉 [概日時計タンパク質KaiA]
Crystal Structure of Circadian Clock Protein KaiA from Synechococcus elongatus.

1r9f* 〈PDB，Molecule of the Month，今月の分子〉 [siRNA]
Crystal structure of p19 complexed with 19-bp small interfering RNA.

1r9t ｜ Chain A・N・R・T 〈資料，PDB〉 [2006年ノーベル化学賞 / RNAポリメラーゼ]
RNA POLYMERASE II STRAND SEPARATED ELONGATION COMPLEX, MISMATCHED NUCLEOTIDE.

2rcf* 〈PDB〉 [カルボキシソーム / OrfA]
Carboxysome Shell protein, OrfA from H. Neapolitanus.

2rcjα炭素のみ 〈PDB〉 [IgM]
Solution structure of human Immunoglobulin M.

1reqのChain A・B 〈PDB〉
METHYLMALONYL-COA MUTASE.

7reqのChain A 〈PDB〉 [CoB₁₂]
Methylmalonyl-Coa Mutase, 2-Carboxypropyl-Coa Inhibitor Complex.

2rfcのChain A* 〈PDB〉 [P450 / CYP231A2]
Ligand bound (4-phenylimidazole) Crystal Structure of a Cytochrome P450 from the Thermoacidophilic Archaeon Picrophilus Torridus.

2rft 〈PDB〉 [インフルエンザウイルスBのヘマグルチニン / LSTaレセプター]
Crystal structure of influenza B virus hemagglutinin in complex with LSTa receptor analog.

2rfz 〈PDB〉 [セロビオヒドロラーゼ / セロトリオース]
Crystal structure of cellobiohydrolase from Melanocarpus albomyces complexed with cellotriose.

1rguのChain A 〈PDB〉 [CoB₁₂]
The Crystal Structure Of Human Tyrosyl-DNA Phosphodiesterase Complexed With Vanadate, Octopamine, and Tetranucleotide Agtg.

2rh1* 〈PDB，今月の分子〉 [β₂アドレナリンレセプター / Gタンパク質 / GPCR / コレステロール]
High resolution crystal structure of human B2-adrenergic G protein-coupled receptor.

2rhe 〈PDB〉 [4-175]
Structure of a novel Bence-Jones protein (Rhe) fragment at 1.6Å resolution.

2rhk 〈PDB〉 [鳥インフルエンザウイルスNS1タンパク質]
Crystal structure of influenza A NS1A protein in complex with F2F3 fragment of human cellular factor CPSF30.

1ri1 〈PDB，今月の分子〉 [mRNAのキャップ形成 / メチルトランスフェラーゼ]
Structure and mechanism of mRNA cap (guanine N-7) methyltransferase.

2ri9 〈PDB〉 [マンノシダーゼ]
Penicillium citrinum alpha-1,2-mannosidase in complex with a substrate analog.

1rk3 〈PDB〉 [活性型ビタミンD₃]
Crystal Structure Of The Rat Vitamin D Receptor Ligand Binding Domain Complexed With 1,25-Dihydroxyvitamin D3 and A Synthetic Peptide Containing The Nr2 Box Of Drip 205.

2rki 〈PDB〉 [HIV-1 / 非ヌクレオシド系逆転写酵素阻害剤（NNRTI）]
Crystal Structure of HIV-1 Reverse Transcriptase (RT) in Complex with a triazole derived NNRTI.

2rkjのChain A-D 〈PDB〉 [イントロンRNA]
Cocrystal structure of a tyrosyl-tRNA synthetase splicing factor with a group I intron RNA.

2rl6 〈PDB〉 [マンノース6リン酸レセプター]
Crystal Structure cation-dependent mannose 6-phosphate receptor at pH 7.4.

1rl8 〈PDB〉 [HIVプロテアーゼ阻害剤リトナビル]
Crystal structure of the complex of resistant strain of hiv-1 protease(v82a mutant) with ritonavir.

1rlbのChain E 〈PDB〉 [レチノール / βバレル型 / 14-17]
Retinol Binding Protein Complexed With Transthyretin.

2rll 〈PDB〉 [HIV-1 / CCR5 N末端]　 スルホチロシン（Tys）選択
CCR5 Nt(7-15).

6rlx* [リラキシン] 〈PDB〉
X-RAY STRUCTURE OF HUMAN RELAXIN AT 1.5 ANGSTROMS. COMPARISON TO INSULIN AND IMPLICATIONS FOR RECEPTOR BINDING DETERMINANTS.

2rnmのModel 1 〈PDB〉 [プリオン，アミロイド]
Structure of The HET-s(218-289) prion in its amyloid form obtained by solid-state NMR.

2roeのModel 1 〈PDB〉 [TTHA1718（京都大学）]
Solution structure of thermus thermophilus HB8 TTHA1718 protein in vitro.

2rogのModel 1 〈PDB〉 [TTHA1718（京都大学）]
Solution structure of Thermus thermophilus HB8 TTHA1718 protein in living E. coli cells.

2rpfのModel 1##（原子No.50，119削除） 〈PDB〉 [RecO-DNA（Synthetic construct，理研）]
RecO-bound ssDNA.

6rsa ｜ SITE 〈PDB〉　　※参考： α-helix部分の例（Ala4-His12） ｜ β-sheet部分の例（Val43-Val47 & Ile81-Arg85）
Nuclear magnetic resonance and neutron diffraction studies of the complex of ribonuclease A with uridine vanadate, a transition-state analogue.

8rsaのChain A ｜ SITE 〈PDB〉
Crystal structure of two covalent nucleoside derivatives of ribonuclease A.

1rta ｜ SITE(ACT+Ribonuclease A) 〈PDB〉
Crystal structure disposition of thymidylic acid tetramer in complex with ribonuclease A.

1rtm 〈PDB〉 [レクチン / 15-173]
Trimeric structure of a C-type mannose-binding protein.

8rucのChain A ｜ SITE [ルビスコ] 〈PDB〉
Activated Spinach Rubisco Complexed With 2-Carboxyarabinitol Bisphosphate.

1ruy 〈PDB〉 [豚インフルエンザ / ヘマグルチニン / H1N1]
1930 Swine H1 Hemagglutinin.

1rv1 〈PDB〉
Crystal Structure Of Human Mdm2 With An Imidazoline Inhibitor.

3rvyの4量体（Chain AB×2）* 〈PDB，Nature ハイライト〉 [Na⁺チャネル]
Crystal structure of the NavAb voltage-gated sodium channel (Ile217Cys, 2.7 Å).

1rw5のModel 1 〈PDB〉 [プロラクチン]
Solution structure of human prolactin.

1ry0のChain A 〈PDB〉 [プロスタグランジン合成酵素 / プロスタグランジンD2]
Structure of prostaglandin F synthase with prostaglandin D2.

3rze*（ドキセピンは5EHとD7Vの2構造重ね合わせ） 〈PDB，京都大学プレスリリース〉 [ヒスタミンH₁受容体（H1R） / GPCR / 花粉症 / アレルギー / ドキセピン]
Structure of the human histamine H1 receptor in complex with doxepin.

1s1qのChain A・B 〈資料，PDB〉 [ユビキチン]
Tsg101(Uev) Domain In Complex With Ubiquitin.

1s4n 〈PDB〉
Crystal Structure Of Yeast 1,2-Mannosyltransferase Kre2P/Mnt1P.

1s5l 〈PDB，今月の分子〉 [光合成 / 光化学系II]
Architecture of the photosynthetic oxygen evolving center.

1s6lのModel 1 〈PDB〉 [アルキル水銀リアーゼ（EC.4.99.1.2） / MerB / 2-10]　 Cys96・Cys159・Cys160選択（現代化学2007年10号p.8参照；3f0p，3f2h，3fn8と比較）
Solution structure of MerB, the Organomercurial Lyase involved in the bacterial mercury resistance system.

1s78のChain A・C・D 〈PDB〉 [ペルツズマブ]
Insights Into Erbb Signaling From The Structure Of The Erbb2-Pertuzumab Complex.

1sdyのChain A ｜ SITE 〈PDB〉
Structure solution and molecular dynamics refinement of the yeast Cu, Zn enzyme superoxide dismutase.

1sgk 〈PDB〉 [ジフテリア毒素]
NUCLEOTIDE-FREE DIPHTHERIA TOXIN.

1shs ‖ 参考：PQSによる二十四量体 〈PDB〉 [低分子量熱ショックタンパク質]
SMALL HEAT SHOCK PROTEIN FROM METHANOCOCCUS JANNASCHII.

1si3* 〈PDB，Molecule of the Month，今月の分子〉 [siRNA / PAZドメイン]
Crystal structure of the PAZ domain of human eIF2c1 in complex with a 9-mer siRNA-like duplex.

1sl9 〈PDB〉 [蛍光タンパク質]
Obelin from Obelia longissima.

1slt ｜ Chain A ｜ SITE(NAG+GAL) 〈PDB〉
Structure of S-lectin, a developmentally regulated vertebrate β-galactoside-binding protein.

1smyのChain A-F 〈PDB〉 [転写調節 / RNAポリメラーゼ]
Structural basis for transcription regulation by alarmone ppGpp.

3sn6 〈PDB〉 [GPCR / β₂アドレナリン受容体（β₂AR） / Gsタンパク質]
Crystal structure of the beta2 adrenergic receptor-Gs protein complex.

2sodのChain B・G* 〈PDB，Molecule of the Month，今月の分子〉 [SOD / 超酸化物不均化酵素]
DETERMINATION AND ANALYSIS OF THE 2 ANGSTROM STRUCTURE OF COPPER, ZINC SUPEROXIDE DISMUTASE.

1spd 〈PDB〉 [ALS・FALS / SOD]
AMYOTROPHIC LATERAL SCLEROSIS AND STRUCTURAL DEFECTS IN CU,ZN SUPEROXIDE DISMUTASE.

3sqgのChain A-C 〈PDB，JST資料〉 [メタン分解酵素]
Crystal structure of a methyl-coenzyme M reductase purified from Black Sea mats.

1sqo 〈PDB〉
Substituted 2-Naphthamidine Inhibitors Of Urokinase.

2src 〈PDB〉
Crystal Structure Of Human Tyrosine-Protein Kinase C-Src, In Complex With Amp-Pnp.

2stv 〈PDB〉 [4-175]
Structure of satellite tobacco necrosis virus after crystallographic refinement at 2.5Å resolution.

1su4 〈PDB，今月の分子〉 [カルシウムポンプ]
Crystal structure of calcium ATPase with two bound calcium ions.

1sx6 〈PDB〉 [糖脂質輸送タンパク質 / スフィンゴ糖脂質]
Crystal structure of human Glycolipid Transfer protein in lactosylceramide-bound form.

1sxsのChain A ｜ SITE 〈PDB〉
Reduced Bovine Superoxide Dismutase At pH 5.0 Complexed With Thiocyanate.

1sxzのChain A ｜ SITE 〈PDB〉
Reduced Bovine Superoxide Dismutase At pH 5.0 Complexed With Azide.

1t03のChain A・P・T##（B配座削除） 〈資料，PDB〉 [HIV / テノホビル(TDF)]
HIV-1 Reverse Transcriptase Crosslinked To Tenofovir Terminated Template-Primer (Complex P).

1t16のChain A 〈PDB〉 [脂肪酸トランスポーター]
Crystal Structure Of The Bacterial Fatty Acid Transporter Fadl From Escherichia Coli.

1t2k* ｜ 1t2k・2pi0・2o6g・2o61複合体 〈PDB，今月の分子〉 [エンハンセオソーム（転写因子複合体） / インターフェロン-βエンハンサー / DNA]
Crystal structure of ATF-2/c-Jun and IRF-3 bound to the interferon-beta enhancer.

1t3g 〈PDB〉 [IL-1RAPL1 / インターロイキン1受容体アクセサリータンパク質1]
Crystal structure of the Toll/interleukin-1 receptor (TIR) domain of human IL-1RAPL.

1t4eのChain A 〈PDB〉 [p53 / ベンゾジアゼピン系化合物]
Structure of Human MDM2 in complex with a Benzodiazepine Inhibitor.

1t4iのChain A・B ｜ チミン二量体部分# 〈資料，PDB〉 [Thymine Dimer]　 Dimerの不要結合削除
Crystal Structure Of A DNA Decamer Containing A Thymine- Dimer.

1t4y 〈PDB〉
Solution structure of the N-terminal domain of Synechococcus elongatus SasA (average minimized structure).

1t69 〈PDB〉 [ヒストンデアセチラーゼ（HDAC）阻害剤 / SAHA]
Crystal Structure Of Human Hdac8 Complexed With Saha.

1t73 〈PDB〉
Crystal Structure Of The Androgen Receptor Ligand Binding Domain In Complex With A Fxxff Motif.

1t76 〈PDB〉
Crystal Structure Of The Androgen Receptor Ligand Binding Domain In Complex With A Wxxvw Motif.

7taa 〈PDB，Molecule of the Month〉 [コウジカビ / タカアミラーゼ / アカルボース（α-グルコシダーゼ阻害薬，糖尿病治療薬）]
FAMILY 13 ALPHA AMYLASE IN COMPLEX WITH ACARBOSE.

1tau 〈PDB，eProtS〉 [DNAポリメラーゼ]
Structure Of DNA Polymerase.

1tb6* 〈PDB〉 [アンチトロンビン-トロンビン-ヘパリン三元複合体]
2.5Å Crystal Structure of the Antithrombin-Thrombin-Heparin Ternary Complex.

1tbgのChain A・E 〈PDB〉
β-γ Dimer Of The Heterotrimeric G-Protein Transducin.

1tco# ｜ SITE# 〈PDB〉 [タクロリムス]
Ternary Complex Of A Calcineurin A Fragment, Calcineurin B, Fkbp12 and The Immunosuppressant Drug Fk506 (Tacrolimus).

1tehのChain A* ｜ SITE 〈資料，PDB〉
Structure Of Human Liver Chichi Alcohol Dehydrogenase (A Glutathione-Dependent Formaldehyde Dehydrogenase).

1tf3のModel 1＋DNA 〈資料，PDB〉
Tfiiia Finger 1-3 Bound To DNA, NMR, 22 Structures.

2tio 〈PDB，Molecule of the Month〉 [トリプシン / シクロヘキサン]
LOW PACKING DENSITY FORM OF BOVINE BETA-TRYPSIN IN CYCLOHEXANE.

1tf7 〈PDB〉 [時計タンパク質KaiC]
Crystal Structure Of Circadian Clock Protein Kaic.

1thaのChain A*# ｜ SITE 〈資料，PDB〉
Mechanism of molecular recognition. Structural aspects of 3,3'-diiodo-L-thyronine binding to human serum transthyretin.

1thbのChain A 〈PDB〉 [4-175]
Refinement of a partially oxygenated T state human haemoglobin at 1.5Å resolution.

1thcのChain A ｜ SITE(130) 〈PDB〉
Crystal structure determination at 2.3-Å resolution of human transthyretin-3',5'-dibromo-2',4,4',6-tetrahydroxyaurone complex.

1thw 〈PDB〉 [甘味タンパク質ソーマチン]
Structures Of 3 Crystal Forms Of The Sweet Protein Thaumatin.

7timのChain A 〈PDB〉 [トリオースリン酸イソメラーゼ（TIM） / TIMバレル / 4-175]
Structure of the triosephosphate isomerase-phosphoglycolohydroxamate complex: an analogue of the intermediate on the reaction pathway.

1tl2* 〈PDB〉 [タキレクチン]
TACHYLECTIN-2 FROM TACHYPLEUS TRIDENTATUS (JAPANESE HORSESHOE CRAB).

2tmv ‖ 参考：PQSによる49量体（水分子削除） 〈PDB，Molecule of the Month，今月の分子〉 [タバコモザイクウイルス]
Visualization of protein-nucleic acid interactions in a virus. Refined structure of intact tobacco mosaic virus at 2.9Å resolution by X-ray fiber diffraction.

2tplのChain A 〈PDB〉
Tyrosine Phenol-Lyase From Citrobacter Intermedius Complex With 3-(4'-Hydroxyphenyl)Propionic Acid, Pyridoxal-5'-Phosphate and Cs+ Ion.

4tra 〈PDB〉 [tRNA]
Restrained refinement of two crystalline forms of yeast aspartic acid and phenylalanine transfer RNA crystals.

1trz* ｜ Chain A・B 〈PDB，Molecule of the Month〉 [インスリン]
CRYSTALLOGRAPHIC EVIDENCE FOR DUAL COORDINATION AROUND ZINC IN THE T3R3 HUMAN INSULIN HEXAMER.

1tttのChain A・D 〈PDB，Molecule of the Month〉 [6-21]
Phe-tRNA, Elongation Factor Ef-Tu: Gdpnp Ternary Complex.

1txh 〈PDB〉 [コネキシン（theoretical model；α炭素のみ）]
A THEORETICAL C-ALPHA MODEL OF THE TRANSMEMBRANE ALPHA- HELICES IN GAP JUNCTION INTERCELLULAR CHANNELS.

1tupのChain B＋DNA ｜ Zinc Finger 〈資料，PDB〉 [2-10]　 Zinc Finger選択
Tumor Suppressor P53 Complexed With DNA.

1tznのChain A・B・C・D・E・F・O・a・b・c・d・e・f・o 〈PDB，Molecule of the Month〉 [炭疽毒素受容体]
Crystal Structure of the Anthrax Toxin Protective Antigen Heptameric Prepore bound to the VWA domain of CMG2, an anthrax toxin receptor.

1u04* 〈PDB〉 [アルゴノート]
Crystal Structure Of Full Length Argonaute From Pyrococcus Furiosus.

1u19 〈PDB〉 [ウシロドプシン / 水銀イオン]
Crystal Structure of Bovine Rhodopsin at 2.2 Å Resolution.

3u5zのChain A-J 〈PDB，今月の分子〉 [T4ファージ / スライディングクランプ / クランプローダー]
Structure of T4 Bacteriophage clamp loader bound to the T4 clamp, primer-template DNA, and ATP analog.

1u65 〈PDB〉 [アセチルコリンエステラーゼ / イリノテカン（抗がん剤）]
Ache W. CPT-11.

1u6b* 〈PDB〉 [RNA / 自己スプライシング / リボヌクレオタンパク質]
CRYSTAL STRUCTURE OF A SELF-SPLICING GROUP I INTRON WITH BOTH EXONS.

3u6y 〈PDB，理研資料〉 [Alba2 / dsDNA / 古細菌]
Crystal structure of ALBA2-DNA complex.

1u7k*# ｜ 六角形-1 ｜ 六角形-2 ｜ 六角形-3 〈資料，PDB〉 [キャプシド]
Structure Of A Hexameric N-Terminal Domain From Murine Leukemia Virus Capsid.

1u8d 〈PDB，今月の分子〉 [RNA / リボスイッチ / ヒポキサンチン]
Guanine riboswitch bound to hypoxanthine.

1uaoのModel 1 〈資料，PDB〉 [最小のタンパク質（産総研）]　 《参考： MOLDA for Protein Modelingで組立てた同配列α-helix型》
NMR Structure Of Designed Protein, Chignolin, Consisting Of Only Ten Amino Acids (Ensembles).

1ub4 〈PDB〉 [大腸菌のMazE（解毒剤）/MazF（毒素）複合体]
crystal structure of MazEF complex.

1ubq 〈PDB〉 [4-175 | ユビキチン]
Structure of ubiquitin refined at 1.8Å resolution.

1udt 〈PDB〉 [バイアグラ]
Crystal Structure Of Human Phosphodiesterase 5 Complexed With Sildenafil(Viagra).

1uebのChain A 〈資料，PDB〉
Crystal Structure Of Translation Elongation Factor P From Thermus Thermophilus Hb8.

3ug9の2量体（Chain A×2） 〈PDB，SPring-8資料〉 [チャネルロドプシン / 光駆動性陽イオンチャネル / レチナール]
Crystal structure of a protein.

1uhkのChain A 〈PDB〉 [蛍光タンパク質 / エクオリン]
Crystal structure of n-aequorin.

1uj1 〈PDB〉 [SARSプロテアーゼ]
Crystal structure of SARS Coronavirus Main Proteinase (3CLpro).

1ujj 〈PDB〉 [GGA1タンパク質のVHSドメイン / β-セクレターゼ（BACE）]
VHS domain of human GGA1 complexed with C-terminal peptide from BACE.

1ukjのChain A 〈PDB〉 [L-メチオニンγリアーゼ]
Detailed structure of L-Methionine-Lyase from Pseudomonas putida.

3ula 〈PDB〉 [Toll様受容体TLR4 / リンパ球受容体 / リンパ球抗原96 / エリトラン]
Crystal structure of the TV3 mutant F63W-MD-2-Eritoran complex.

1ulf 〈PDB〉 [ガレクチン-2]
CGL2 in complex with Blood Group A tetrasaccharide.

1um2のChain A・C 〈PDB，今月の分子〉 [インテイン]
Crystal Structure of the Vma1-Derived Endonuclease with the Ligated Extein Segment.

1umi* 〈PDB〉 [糖鎖識別ユビキチン連結酵素（東京都医学研究機構）]
Structural basis of sugar-recognizing ubiquitin ligase.

1un6* 〈PDB，Molecule of the Month，今月の分子〉 [Zinc Finger / RNA]
THE CRYSTAL STRUCTURE OF A ZINC FINGER- RNA COMPLEX REVEALS TWO MODES OF MOLECULAR RECOGNITION.

1uob 〈PDB〉 [ペニシリンG]
DEACETOXYCEPHALOSPORIN C SYNTHASE COMPLEXED WITH 2-OXOGLUTARATE AND PENICILLIN G.

1uof 〈PDB〉 [ペニシリンG]
DEACETOXYCEPHALOSPORIN C SYNTHASE COMPLEXED WITH PENICILLIN G.

1uou 〈資料，PDB〉
Crystal Structure Of Human Thymidine Phosphorylase In Complex With A Small Molecule Inhibitor.

1us0##（B配座削除） ｜ SITE## 〈PDB〉 [アルドース還元酵素阻害剤]
Human Aldose Reductase In Complex With Nadp+ and The Inhibitor Idd594 At 0.66 Angstrom.

1utrのChain A 〈資料，PDB〉
Uteroglobin-Pcb Complex (Reduced Form).

2uuh ‖ 参考：PQSによる三量体 〈PDB〉 [ロイコトリエンC₄合成酵素]　 グルタチオン選択
CRYSTAL STRUCTURE OF HUMAN LEUKOTRIENE C4 SYNTHASE IN COMPLEX WITH SUBSTRATE GLUTATHIONE.

1uun（8量体；A・B鎖×4） 〈PDB〉 [ポリン]
MAIN PORIN FROM MYCOBACTERIA SMEGMATIS (MSPA) .

1uv6のChain A・B・C・D・E# ｜ SITE1 ｜ SITE2 〈PDB，Molecule of the Month〉 [アセチルコリン結合性タンパク質 / カルバミルコリン]
X-Ray Structure Of Acetylcholine Binding Protein (Achbp) In Complex With Carbamylcholine.

2uvcChain G 〈PDB，Molecule of the Month，今月の分子〉 [脂肪酸合成酵素]
CRYSTAL STRUCTURE OF FATTY ACID SYNTHASE COMPLEXED WITH NADP+ FROM THERMOMYCES LANUGINOSUS AT 3.1 ANGSTROM RESOLUTION. THIS FILE CONTAINS THE BETA SUBUNITS OF THE FATTY ACID SYNTHASE. THE ENTIRE CRYSTAL STRUCTURE CONSISTS OF ONE HETERODODECAMERIC FATTY ACID SYNTHASE AND IS DESCRIBED IN REMARK 400.

1uw6のChain A・B・C・D・E# ｜ SITE1* ｜ SITE5* 〈PDB〉 [ニコチン]
X-Ray Structure Of Acetylcholine Binding Protein (Achbp) In Complex With Nicotine.

2uwhのChain A* 〈PDB〉 [P450 BM3 / パルミチン酸]
CYTOCHROME P450 BM3 MUTANT IN COMPLEX WITH PALMITIC ACID.

2uxh 〈PDB〉 [転写調節因子 / ケルセチン]
TTGR IN COMPLEX WITH QUERCETIN.

1v0d* 〈PDB，Molecule of the Month〉 [DNA分解酵素CAD（Caspase Activated DNase）]
CRYSTAL STRUCTURE OF CASPASE-ACTIVATED DNASE (CAD) .

2v0mのChain A 〈PDB〉 [P450 3A4 / ケトコナゾール（イミダゾール系抗真菌薬）]
CRYSTAL STRUCTURE OF HUMAN P450 3A4 IN COMPLEX WITH KETOCONAZOLE.

2v0zのChain C 〈PDB〉 [レニン / アリスキレン（高血圧治療薬）]
CRYSTAL STRUCTURE OF RENIN WITH INHIBITOR 10 (ALISKIREN).

2v1c 〈PDB〉 [DNA修復 / DNA / 放射線抵抗性細菌デイノコッカス・ラディオデュランス]
CRYSTAL STRUCTURE AND MUTATIONAL STUDY OF RECOR PROVIDE INSIGHT INTO ITS ROLE IN DNA REPAIR.

1v2z* 〈PDB〉 [時計タンパク質KaiA（カイ・エー）]　 His270選択
Crystal Structure Of The C-Terminal Domain Of Thermosynechococcus Elongatus Bp-1 Kaia.

2v3f 〈PDB〉 [β-グルコシダーゼ]
ACID-BETA-GLUCOSIDASE PRODUCED IN CARROT.

1v3q 〈PDB〉
Structure Of Human Pnp Complexed With Ddi.

3v47 〈PDB〉 [Toll様受容体TLR5 / フラジェリン]
Crystal structure of the N-tetminal fragment of zebrafish TLR5 in complex with Salmonella flagellin.

1v4b 〈PDB〉 [アゾ化合物還元酵素（大腸菌由来）]
The crystal structure of AzoR (Azo Reductase) from Escherichia coli: Oxidized form.

2v4b 〈PDB〉 [ADAMTS-1，Cd・Mg・Na・Ni・Zn]
CRYSTAL STRUCTURE OF HUMAN ADAMTS-1 CATALYTIC DOMAIN AND CYSTEINE-RICH DOMAIN (APO-FORM).

2v5s 〈PDB〉 [ダウン症細胞接着分子（DSCAM）]
STRUCTURAL BASIS FOR DSCAM ISOFORM SPECIFICITY.

1v5w* ‖ 参考：PQSによる十六量体 〈PDB〉 [Dmc1タンパク]
Crystal structure of the human Dmc1 protein.

1v66のModel 1 〈PDB〉 [SUMOリガーゼPIAS1]
Solution structure of human p53 binding domain of PIAS-1.

1v7o 〈PDB〉 [tRNAアミノアシル化 / AlaX]
Alanyl-tRNA synthetase editing domain homologue protein from Pyrococcus horikoshii.

1v81のModel 1 〈PDB〉 [ユビキチン]
Solution structures of ubiquitin at 30 bar and 3 kbar.

2v84 〈PDB〉 [梅毒トレポネーマ（トレポネーマパリダム）]
CRYSTAL STRUCTURE OF THE TP0655 (TPPOTD) LIPOPROTEIN OF TREPONEMA PALLIDUM.

1v8k* 〈資料，PDB〉
The Crystal Structure Of The Minimal Functional Domain Of The Microtubule Destabilizer Kif2C Complexed With Mg-Amppnp.

1v97のChain A [キサンチンデヒドロゲナーゼ / 痛風治療薬FYX-051] ｜ SITE(FYX-051) 〈PDB〉　 Asn768・Glu802・Arg880・Phe914・Phe1009・Glu1261選択
Crystal Structure of Bovine Milk Xanthine Dehydrogenase FYX-051 bound form.

1v9bのChain A-C 〈PDB〉[CutA1（理研）]
Crystal Structure of Pyrococcus Horikoshii CutA1 complexed with Co2+ .

2v9c 〈PDB〉 [アゾリダクターゼ / 緑膿菌 / メチルレッド]
X-RAY CRYSTALLOGRAPHIC STRUCTURE OF A PSEUDOMONAS AERUGINOSA AZOREDUCTASE IN COMPLEX WITH METHYL RED.

2vao* 〈PDB〉 [フラビン酵素]
STRUCTURE OF THE OCTAMERIC FLAVOENZYME VANILLYL-ALCOHOL OXIDASE IN COMPLEX WITH ISOEUGENOL.

2vbc* 〈PDB，Molecule of the Month，今月の分子〉 [デングウイルス]
CRYSTAL STRUCTURE OF THE NS3 PROTEASE-HELICASE FROM DENGUE VIRUS.

2vc2* 〈PDB，今月の分子〉 [インテグリンαIIbβ3 / モノクローナル抗体]
RE-REFINEMENT OF INTEGRIN ALPHAIIBBETA3 HEADPIECE BOUND TO ANTAGONIST L-739758.

2ve3のChain A 〈PDB〉 [P450 / レチノイン酸]
RETINOIC ACID BOUND CYANOBACTERIAL CYP120A1.

1vf7のChain A-H 〈PDB〉 [緑膿菌の薬剤排出ポンプMexA（KEK）]
Crystal Structure Of The Membrane Fusion Protein, Mexa Of The Multidrug Transporter.

2vft 〈PDB〉 [キシリトールオキシダーゼ / D-ソルビトール]
ALDITOL OXIDASE FROM STREPTOMYCES COELICOLOR A3(2): COMPLEX WITH SORBITOL.

2vg5* 〈PDB〉 [HIV-1 / チオカルバメート系非核酸系逆転写酵素阻害剤]
CRYSTAL STRUCTURES OF HIV-1 REVERSE TRANSCRIPTASE COMPLEXES WITH THIOCARBAMATE NON-NUCLEOSIDE INHIBITORS.

3vg9 〈PDB，JST資料〉 [GPCR / アデノシンA2a受容体 / 抗体フラグメント]
Crystal structure of human adenosine A2A receptor with an allosteric inverse-agonist antibody at 2.7 A resolution.

2vgd 〈PDB〉
CRYSTAL STRUCTURE OF ENVIRONMENTAL ISOLATED GH11 IN COMPLEX WITH XYLOBIOSE AND FERULOYL-ARABINO-XYLOTRIOSE.

2vi0 〈PDB〉 [エンドグルカナーゼ（セルラーゼ）]
LICHENASE CTLIC26 IN COMPLEX WITH A THIO-OLIGOSACCHARIDE.

2vjr* ‖ 参考：PQSによる十二量体（Chain A・B × 6）* 〈PDB〉 [フィコエリトリン（色素タンパク質）]
THE STRUCTURE OF PHYCOCYANIN FROM GLOEOBACTER VIOLACEUS.

3vkhのChain A・C 〈PDB，SPring-8資料〉 [モータータンパク質 / ダイニン]
Crystal structure of a motor protein.

2vl0のChain A-E 〈PDB〉 [イオンチャネル]
X-RAY STRUCTURE OF A PENTAMERIC LIGAND GATED ION CHANNEL FROM ERWINIA CHRYSANTHEMI (ELIC).

2vn0* 〈PDB〉 [P450 / トログリタゾン（糖尿病治療薬）]
CYP2C8DH COMPLEXED WITH TROGLITAZONE.

1vnc 〈PDB〉 [クロロペルオキシダーゼ]
CHLOROPEROXIDASE FROM THE FUNGUS CURVULARIA INAEQUALIS.

2vol 〈PDB〉 [TRIM21 / IgG抗体のFc領域]
MURINE TRIM21 IN COMPLEX WITH MURINE IGG FC.

2vq5##（A鎖のHBAは座標2種のうちAのみ） 〈PDB〉 [S-ノルコクラウリンシンターゼ / ドーパミン]
X-RAY STRUCTURE OF NORCOCLAURINE SYNTHASE FROM THALICTRUM FLAVUM IN COMPLEX WITH DOPAMINE AND HYDROXYBENZALDEHYDE.

2vq6 〈PDB〉 [アセチルコリンエステラーゼ / 2-PAM]
TORPEDO CALIFORNICA ACETYLCHOLINESTERASE COMPLEXED WITH 2-PAM.

1vrn 〈PDB〉 [光合成反応中心]
Photosynthetic Reaction Center Blastochloris Viridis (Atcc).

1vsg* 〈PDB〉 [15-106]
2.9 Å resolution structure of the N-terminal domain of a variant surface glycoprotein from Trypanosoma brucei.

2vssのChain D* 〈PDB〉 [HCHL / バニリン]
WILD-TYPE HYDROXYCINNAMOYL-COA HYDRATASE LYASE IN COMPLEX WITH ACETYL-COA AND VANILLIN.

1vth 〈PDB〉 [ダウノマイシン / DNA / インターカレーション]
DNA-Drug Interactions: The Crystal Structures of d(TGTACA) and d(TGATCA) Complexed with Daunomycin.

2vu3 〈PDB〉 [細胞分裂阻害剤 / SBDD（構造に基づく医薬品設計） / AT7519]
IDENTIFICATION OF N-(4-PIPERIDINYL)-4-(2,6-DICHLOROBENZOYLAMINO)-1H-PYRAZOLE-3-CARBOXAMIDE (AT7519), A NOVEL CYCLIN DEPENDENT KINASE INHIBITOR USING FRAGMENT-BASED X-RAY CRYSTALLOGRAPHY AND STRUCTURE BASED DRUG DESIGN.

2vuz 〈PDB〉 [codakine]
CRYSTAL STRUCTURE OF CODAKINE IN COMPLEX WITH BIANTENNARY NONASACCHARIDE AT 1.7Å RESOLUTION.

2vv5 〈PDB，Molecule of the Month，今月の分子〉 [機械受容チャネル（開構造；閉構造は2oau）]
THE OPEN STRUCTURE OF MSCS.

2vxj 〈PDB〉 [緑膿菌 / PA-ILレクチン]
CRYSTAL STRUCTURE OF PA-IL LECTIN COMPLEXED WITH AGAL13BGAL14GLC AT 1.9Å RESOLUTION.

1vxr 〈PDB〉 [アセチルコリンエステラーゼ / VX]
O-Ethylmethylphosphonylated Acetylcholinesterase Obtained By Reaction With O-Ethyl-S-[2-[Bis(1-Methylethyl) Amino]Ethyl] Methylphosphonothioate (Vx).

1vyi 〈PDB〉 [狂犬病ウイルス]
STRUCTURE OF THE C-TERMINAL DOMAIN OF THE POLYMERASE COFACTOR OF RABIES VIRUS: INSIGHTS IN FUNCTION AND EVOLUTION.

2vzvのChain A 〈PDB〉 [エキソキトサナーゼ / キトサン]
SUBSTRATE COMPLEX OF AMYCOLATOPSIS ORIENTALIS EXO-CHITOSANASE CSXA E541A WITH CHITOSAN.

2w1b ‖ 参考：PQSによる三量体 〈PDB，Molecule of the Month，今月の分子〉 [排出ポンプ / AcrB / 胆汁酸]
THE STRUCTURE OF THE EFFLUX PUMP ACRB IN COMPLEX WITH BILE ACID.

1w22のChain A 〈PDB〉 [ヒストンデアセチラーゼ（HDAC）阻害剤]
Crystal Structure Of Inhibited Human Hdac8.

2w63 〈PDB〉 [糖脂質アンカータンパク質]
SACCHAROMYCES CEREVISIAE GAS2P IN COMPLEX WITH LAMINARITRIOSE AND LAMINARITETRAOSE.

2w69 ｜ Chain A〈PDB〉 [インフルエンザウイルス / キャップスナッチング]
INFLUENZA POLYMERASE FRAGMENT.

1w6k 〈PDB，Molecule of the Month，今月の分子〉 [オキシドスクアレンシクラーゼ（OSC） / ラノステロール]　 lanosterol選択
STRUCTURE OF HUMAN OSC IN COMPLEX WITH LANOSTEROL.

2w8fのChain A-E* 〈PDB〉 [ジャンボアメフラシ / アセチルコリン結合性タンパク質 / 三環系抗うつ剤 / in silico]
APLYSIA CALIFORNICA ACHBP BOUND TO IN SILICO COMPOUND 31.

1wavのChain A・B 〈資料１・２，PDB〉 [インスリン]
Crystal Structure Of Form B Monoclinic Crystal Of Insulin.

2wdi 4.87MB 〈PDB，2009年ノーベル化学賞〉 [70Sリボソーム]
STRUCTURE OF THE THERMUS THERMOPHILUS 70S RIBOSOME IN COMPLEX WITH MRNA, PAROMOMYCIN, ACYLATED A-SITE TRNA, DEACYLATED P-SITE TRNA, AND E-SITE TRNA. THIS FILE CONTAINS THE 50S SUBUNIT FOR MOLECULE I.

1wdt 〈PDB〉 [伸長因子（理研）]
Crystal structure of ttk003000868 from Thermus thermophilus HB8.

2weq ‖ 参考：PQSによる二量体 〈PDB，今月の分子〉 [Hsp90 / ゲルダナマイシン（Hsp90阻害剤）]
YEAST HSP90 N-TERMINAL DOMAIN LI-IV MUTANT WITH GELDANAMYCIN.

1wg0* 〈PDB〉 [ガンキリン（理研）のホモログ]
Structural comparison of Nas6p protein structures in two different crystal forms.

2wgy 〈PDB〉 [P450 / CYP130]
CRYSTAL STRUCTURE OF THE G243A MUTANT OF CYP130 FROM M. TUBERCULOSIS.

1wlvのChain A-D 〈PDB〉 [PaaIタンパク質（理研）]
Crystal structure of TT0310 protein from Thermus thermophilus HB8.

2wnc 〈PDB〉 [アセチルコリン結合タンパク質（AChBP） / トロピセトロン（5-HT3遮断薬，制吐薬）]
CRYSTAL STRUCTURE OF APLYSIA ACHBP IN COMPLEX WITH TROPISETRON.

1wni* 〈PDB〉 [ハブ毒 / 亜鉛プロテアーゼ]
Crystal Structure of H2-Proteinase.

2won 〈PDB〉 [HIV-1 / 非ヌクレオシド系逆転写酵素阻害剤（UK-453061）]
CRYSTAL STRUCTURE OF UK-453061 BOUND TO HIV-1 REVERSE TRANSCRIPTASE (WILD-TYPE).

1wp1* 〈PDB〉 [緑膿菌の薬剤排出ポンプOprM（KEK）]
Crystal structure of the drug-discharge outer membrane protein, OprM.

1wpe* 〈PDB〉 [カルシウムポンプ]
Crystal Structure Of The Sr Calcium Pump With Bound Aluminium Fluoride, ADP and Calcium.

1wpv* 〈PDB〉 [アンチターミネーション]
Crystal Structure Of Activated Binary Complex Of Hutp, An RNA Binding Anti-Termination Protein.

1wqs 〈PDB〉 [ノロウイルス]
Crystal structure of Norovirus 3C-like protease.

2wqyのChain A-D 〈PDB〉 [コハク酸デヒドロゲナーゼ / シトクロムb / カルボキシン / Fe2S2 / Fe3S4 / Fe4S4]
REMODELLING OF CARBOXIN BINDING TO THE Q-SITE OF AVIAN RESPIRATORY COMPLEX II.

1wqz*（D₂O） 〈PDB〉 [B-DNA / 中性子回折]
Complicated water orientations in the minor groove of B-DNA decamer D(CCATTAATGG)2 observed by neutron diffraction measurements .

1wsvのChain A 〈PDB〉 [ヒトTタンパク質（SPring-8）]
Crystal Structure of Human T-protein of Glycine Cleavage System.

1wtc 〈PDB〉 [セリンラセマーゼ]
Crystal Structure of S.ponbe Serine Racemase complex with AMPPCP.

1wua* 〈PDB〉 [アメフラシ由来アプリロニンAとアクチンとの複合体構造（理研）]
The structure of Aplyronine A-actin complex.

1wvr 〈PDB〉 [ハブ毒 / 神経毒triflin]
Crystal Structure of a CRISP family Ca-channel blocker derived from snake venom.

1wvy 〈PDB〉 [DAPキナーゼ]
Crystal structures of kinase domain of DAP kinase in complex with small molecular inhibitors.

1wx2 〈PDB〉 [チロシナーゼ / キャディータンパク質 / 過酸化水素]
Crystal Structure of the oxy-form of the copper-bound Streptomyces castaneoglobisporus tyrosinase complexed with a caddie protein prepared by the addition of hydrogenperoxide.

1wy9* 〈PDB〉 [ミクログリア / Iba1]
Crystal structure of microglia-specific protein, Iba1.

1wz2のChain A・C 〈PDB〉 [ロイシルtRNA合成酵素LeuRSとtRNAの複合体（理研）]
The Crystal Structure Of Leucyl-tRNA Synthetase and tRNA(Leucine) Complex.

1x0oのModel 1 〈PDB〉 [ARNT（AhRとヘテロ二量体を形成する）]
human ARNT C-terminal PAS domain.

2x72* 〈PDB，Nature ハイライト〉 [ロドプシン]
CRYSTAL STRUCTURE OF THE CONSTITUTIVELY ACTIVE E113Q,N2C, D282C RHODOPSIN MUTANT WITH BOUND GALPHACT PEPTIDE.

2x8m 〈PDB〉 [コリン結合タンパク質 / イプラトロピウム（抗コリン薬，慢性閉塞性肺疾患治療）]
CRYSTAL STRUCTURE OF CBPF IN COMPLEX WITH IPRATROPIUM BY SOAKING.

1xg0 〈PDB〉 [光合成 / 集光性タンパク質 / フィコエリトリン（フィコエリスリン） / フィコエリスロビリン]
High resolution crystal structure of phycoerythrin 545 from the marine cryptophyte rhodomonas CS24.

1xhb 〈PDB〉
The Crystal Structure of UDP-GalNAc: polypeptide alpha-N-acetylgalactosaminyltransferase-T1.

1xi4のChain A・B・C α-炭素原子のみ 〈PDB，Molecule of the Month，今月の分子，資料〉 [クラスリン / 13-63]
Clathrin D6 Coat.

1xj9* 〈PDB〉 [ペプチド核酸（PNA）]
Crystal structure of a partly self-complementary peptide nucleic acid (PNA) oligomer showing a duplex-triplex network.

1xjd 〈PDB〉 [スタウロスポリン]
Crystal Structure Of Pkc-Θ Complexed With Staurosporine At 2Å Resolution.

1xk4のChain A-D 〈PDB〉 [カルプロテクチン / カルグラニュリン / S100A8 / S100A9]
Crystal structure of human calprotectin(S100A8/S100A9).

2xkk* 〈PDB〉 [アシネトバクター・バウマニ（アシネトバクター・バウマンニ） / モキシフロキサシン（フルオロキノロン系抗菌薬）]
CRYSTAL STRUCTURE OF MOXIFLOXACIN, DNA, AND A. BAUMANNII TOPO IV (PARE-PARC FUSION TRUNCATE).

2xkw##（A鎖のP1Bは座標2種のうちAのみ） 〈PDB〉 [PPAR-γ / ピオグリタゾン　(糖尿病治療薬) ]
LIGAND BINDING DOMAIN OF HUMAN PPAR-GAMMA IN COMPLEX WITH THE AGONIST PIOGLITAZONE.

2xow* 〈PDB，今月の分子〉 [ロンボイドプロテアーゼGlpG]
STRUCTURE OF GLPG IN COMPLEX WITH A MECHANISM-BASED ISOCOUMARIN INHIBITOR.

2xp2 〈PDB〉 [未分化リンパ腫キナーゼ（ALK） / クリゾチニブ]
STRUCTURE OF THE HUMAN ANAPLASTIC LYMPHOMA KINASE IN COMPLEX WITH CRIZOTINIB (PF-02341066).

2xrxのChain A-F 〈PDB〉 [ビフェニルジオキシゲナーゼ / ビフェニル]
CRYSTAL STRUCTURE OF BIPHENYL DIOXYGENASE IN COMPLEX WITH BIPHENYL FROM BURKHOLDERIA XENOVORANS LB400.

2xshのChain A-F 〈PDB〉 [ビフェニルジオキシゲナーゼ / 2,6-ジクロロビフェニル]
CRYSTAL STRUCTURE OF P4 VARIANT OF BIPHENYL DIOXYGENASE FROM BURKHOLDERIA XENOVORANS LB400 IN COMPLEX WITH 2,6 DI CHLOROBIPHENYL.

1xtc 〈資料，PDB，Molecule of the Month，eProtS〉 [コレラ毒素]　 D-H鎖（Bサブユニット5量体）選択
Cholera Toxin

1xvaのChain A ｜ (SITE) 〈PDB〉 [9-1069]
Methyltransferase.

1xzx 〈PDB〉 [3,5,3'-トリヨードチロニン（甲状腺ホルモン，T₃）]
Thyroxine-Thyroid Hormone Receptor Interactions.

1xzz* 〈PDB〉 [IP₃受容体]
Crystal structure of the ligand binding suppressor domain of type 1 inositol 1,4,5-trisphosphate receptor.

1y0x 〈PDB〉 [チロキシン（甲状腺ホルモン，T₄）]
Thyroxine-Thyroid Hormone Receptor Interactions.

1y3p 〈PDB〉 [アルギン酸結合タンパク質 Algq1]
Structure Of Algq1, Alginate-Binding Protein, Complexed With An Alginate Tetrasaccharide.

2y3w 〈PDB，東京大学プレスリリース〉 [SAS-6]
N-TERMINAL HEAD DOMAIN AND BEGINNING OF COILED COIL DOMAIN OF DANIO RERIO SAS-6.

1y73 〈PDB〉 [HIV / 二本鎖RNA]
HIV-1 Dis(Mal) Duplex Pt-Soaked.

1ycr 〈資料，PDB〉
Mdm2 Bound To The Transactivation Domain Of P53.

1yet 〈資料，PDB，今月の分子〉 [Hsp90 / ゲルダナマイシン（Hsp90阻害剤）]
Geldanamycin Bound To The Hsp90 Geldanamycin-Binding Domain.

1yewのChain A-C 〈PDB〉 [膜結合型メタンモノオキシゲナーゼ（pMMO）]　 His33・137・139（二核銅近傍）選択
Crystal structure of particulate methane monooxygenase.

1yf4 ｜ Chain B（vasopressin） [バソプレシン] 〈PDB〉
Crystal Structure of trypsin-vasopressin complex.

2yfjのChain A-F 〈PDB〉 [ビフェニルジオキシゲナーゼ / ジベンゾフラン / 鉄硫黄クラスター]
CRYSTAL STRUCTURE OF BIPHENYL DIOXYGENASE VARIANT RR41 WITH DIBENZOFURAN.

2yflのChain A-F 〈PDB〉 [ビフェニルジオキシゲナーゼ / ダイオキシン類 / PCDF / 2-クロロベンゾフラン / 鉄硫黄クラスターFe2S2]
Crystal Structure of Biphenyl dioxygenase variant RR41 with 2-chloro dibenzofuran.

1yhu 〈PDB〉 [チューブワーム / ヘモグロビン]
Crystal structure of Riftia pachyptila C1 hemoglobin reveals novel assembly of 24 subunits.

1yi5 〈PDB，Molecule of the Month〉 [コブラ毒 | アセチルコリン結合性タンパク質]
Crystal Structure Of The A-Cobratoxin-Achbp Complex.

1yjp* 〈PDB〉 [酵母プリオン[PSI⁺]の原因Sup35]
Structure of GNNQQNY from yeast prion Sup35.

1yk0のModel 1 〈PDB〉 [心房性ナトリウム利尿ペプチド（atrial natriuretic peptide，ANP）と受容体]
structure of natriuretic peptide receptor-C complexed with atrial natriuretic peptide.

1ynw 〈PDB〉 [ビタミンD受容体 / 9-cisレチノイン酸受容体（RAR）]
Crystal Structure Of Vitmain D Receptor and 9-Cis Retinoic Acid Receptor DNA-Binding Domains Bound To A Dr3 Response Element.

1yo8 〈PDB〉 [トロンボスポンジン / THBS2]
Strucuture of the C-terminal domain of human thrombospondin-2.

1yprのChain A* 〈資料，PDB〉
Saccharomyces Cerevisiae (Yeast) Profilin.

1yseのModel 1 〈PDB〉 [SATB1]
Solution structure of the MAR-binding domain of SATB1.

2yve 〈PDB〉 [転写制御因子 / メチレンブルー]
Crystal structure of the TetR-family portein CGL2612 from C.glutamicum bound to methylene blue.

1yvnのChain A 〈PDB〉 [アクチン]
The Yeast Actin Val 159 Asn Mutant Complex With Human Gelsolin Segment 1.

2yxuのChain A 〈PDB〉 [ピリドキサールキナーゼ（ビタミンB₆活性化酵素）]
Human Pyridoxal Kinase.

2yyfのModel 1 〈PDB〉 [ナンヨウクロミナシ（貝） / コノペプチド]
Purification and structural characterization of a D-amino acid containing conopeptide, marmophine, from Conus marmoreus.

1yzi 〈PDB〉 [ヘモグロビン / 一酸化炭素 / トルエン]　 一酸化炭素 選択
A novel quaternary structure of human carbonmonoxy hemoglobin.

2z1kのChain D 〈PDB〉 [プルラナーゼ / β-シクロデキストリン]
Crystal Structure of Ttha1563 from Thermus thermophilus HB8.

2z2gのModel 1 〈PDB〉 [複素芳香族アミンIQ]
NMR Structure of the IQ-modified Dodecamer CTC[IQ]GGCGCCATC.

2z2p* 〈PDB〉 [キヌプリスチン（ストレプトグラミン系抗生物質）]
Crystal Structure of catalytically inactive H270A virginiamycin B lyase from Staphylococcus aureus with Quinupristin.

1z2rのChain A・B 〈PDB〉 [脂質輸送，ABC（ATP-binding cassette）ランスポーター，多剤耐性]
Structure of the ABC transporter MSBA in complex with adp-vanadate and lipopolysaccharide.

1z32 〈PDB〉[唾液アミラーゼ]
Structure-function relationships in human salivary alpha-amylase: Role of aromatic residues.

2z36のChain A 〈PDB〉 [P450 MoxA / CYP105]
Crystal structure of cytochrome P450 MoxA from Nonomuraea recticatena (CYP105).

2z3c 〈PDB〉 [SARSコロナウイルス]
A Mechanistic view of Enzyme Inhibition and Peptide Hydrolysis in the Active Site of the SARS-CoV 3C-Like peptidase.

2z3u 〈PDB〉 [抗がん剤インドロカルバゾール / クロモピロリン酸（CPA） / シトクロムP450StaP（理研）]　 CPA選択
Crystal Structure of Chromopyrrolic Acid Bound Cytochrome P450 StaP (CYP245A1).

2z4bのChain A* 〈PDB〉 [エストロゲン受容体]
Estrogen receptor beta ligand-binding domain complexed to a benzopyran ligand.

2z55のChain A* 〈PDB〉 [アーキロドプシン / バクテリオルベリン]
Bacterioruberin in the trimeric structure of archaerhodopsin-2.

2z5r* ‖ 参考：PQSによる二十四量体 〈PDB，JASRIプレスリリース〉 [フェリチン]
Apo-Fr with high content of Pd ions.

2z5z* 〈PDB〉 [ラクトペルオキシダーゼ]
Crystal structure of the complex of buffalo Lactoperoxidase with fluoride ion at 3.5Å resolution.

2z62 〈PDB〉 [トール様受容体TLR4 / リポ多糖類（LPS）]
Crystal structure of the TV3 hybrid of human TLR4 and hagfish VLRB.61.

2z65のChain A・C 〈PDB〉 [Toll様受容体TLR4 / MD-2 / リポ多糖（LPS）]
Crystal structure of the human TLR4 TV3 hybrid-MD-2-Eritoran complex.

1z6i* 〈PDB〉 [PGRP-LCa（KEK）]
Crystal structure of the ectodomain of Drosophila transmembrane receptor PGRP-LCa.

2z6w 〈PDB〉 [シクロフィリンD / シクロスポリンA]
Crystal structure of human cyclophilin D in complex with cyclosporin A.

2z73のChain A* 〈PDB〉 [イカロドプシン]
Crystal structure of squid rhodopsin.

2z7x 〈PDB，今月の分子〉 [Toll様受容体TLR1/TLR2 / リポ蛋白質]
Crystal structure of the TLR1-TLR2 heterodimer induced by binding of a tri-acylated lipopeptide.

2z83 〈PDB〉 [日本脳炎ウイルス]
Crystal Structure of Catalytic Domain of Japanese Encephalitis Virus NS3 Helicase/Nucleoside Triphosphatase at a Resolution 1.8.

2z9lのChain A 〈PDB〉 [SARSコロナウイルス / JMF1586]
complex structure of SARS-CoV 3C-like protease with JMF1586.

2z9y* 〈PDB〉 [脂質輸送タンパク質 / セラミド選別輸送タンパク質（CERT） / ジアシルグリセロール]
Crystal structure of CERT START domain in complex with C10-diacylglycerol.

2za0 〈PDB〉 [メチルゲルフェリン-マウスグリオキサラーゼI複合体（理研）]
Crystal structure of mouse glyoxalase I complexed with methyl-gerfelin.

1zag* 〈PDB〉
HUMAN ZINC-ALPHA-2-GLYCOPROTEIN.

2zb6* 〈PDB〉 [麻疹ウイルス / ヘマグルチニン]
Crystal structure of the measles virus hemagglutinin (oligo-sugar type).

2zbz 〈PDB〉 [P450 105A1 / 1,25-ジヒドロキシビタミンD₃]
Crystal structure of vitamin D hydroxylase cytochrome P450 105A1 (R84A mutant) in complex with 1,25-dihydroxyvitamin D3.

2zd1 〈PDB〉 [HIV-1 / 非核酸系逆転写酵素阻害薬リルピヴィリン（リルピビリン，TMC-278）]
Crystal Structure of HIV-1 Reverse Transcriptase (RT) in Complex with TMC278 (Rilpivirine), A Non-nucleoside RT Inhibitor.

2zeb 〈PDB〉 [マスト細胞 / トリプターゼ]
Potent, Nonpeptide Inhibitors of Human Mast Cell Tryptase.

1zei 〈PDB〉[インスリン / 14-45]
Cross-Linked B28 Asp Insulin.

2zey 〈PDB〉 [糖質結合モジュール]
Family 16 carbohydrate binding module.

1zgk 〈PDB〉
1.35 Angstrom Structure Of The Kelch Domain Of Keap1.

2zhm 〈PDB〉 [ガレクチン-9]
Crystal structure of human galectin-9 N-terminal CRD in complex with N-acetyllactosamine trimer (crystal 1).

2zhrのChain A・C* 〈PDB〉 [β-セクレターゼ BACE1（理研）]　 Asp32・Asp228選択
Crystal structure of BACE1 in complex with OM99-2 at pH 5.0.

2zht* 〈PDB〉 [β-セクレターゼ BACE1（理研）]　 Asp32・Asp228選択
Crystal structure of BACE1 at pH 4.5.

1zhy 〈PDB〉 [オキシステロール結合タンパク質 / コレステロール]
Structure of yeast oxysterol binding protein Osh4 in complex with cholesterol.

2zju* 〈PDB〉 [アセチルコリン結合タンパク質 / ヨーロッパモノアラガイ / イミダクロプリド（殺虫剤）]
Crystal Structure of Lymnaea stagnalis Acetylcholine Binding Protein (Ls-AChBP) Complexed with Clothianidin.

2zjw 〈PDB〉 [カゼインキナーゼII / エラグ酸（四環ポリフェノール）]
Crystal structure of human CK2 alpha complexed with Ellagic acid.

2zkc 〈PDB〉 [エストロゲン関連受容体γ / 内分泌攪乱物質（環境ホルモン） / ビスフェノールZ]
Crystal structure of human estrogen-related receptor gamma ligand binding domain complex with bisphenol Z.

2zke* 〈PDB〉 [UHRF1 / DNAメチル化]
Crystal structure of the SRA domain of mouse Np95 in complex with hemi-methylated CpG DNA.

2zl0 〈PDB〉 [ATP依存性Clpプロテアーゼ / 14量体]
Crystal structure of H.pylori ClpP.

2zl6 〈PDB〉 [ノーウォークウイルス / カプシドタンパク質]
Atomic resolution structural characterization of recognition of histo-blood group antigens by Norwalk virus.

1zlw 〈PDB〉 [抗体2G12 / HIV-1]
Fab 2G12 + Man8.

2zm8 〈PDB〉 [合成繊維分解酵素 / ナイロン]
Structure of 6-Aminohexanoate-dimer Hydrolase, S112A/D370Y Mutant Complexed with 6-Aminohexanoate-dimer.

2zmb 〈PDB〉 [ラクトトランスフェリン / パレコキシブ（コキシブ系非ステロイド性抗炎症薬；COX-2選択的阻害）]
Crystal structure of the complex of C-terminal lobe of bovine lactoferrin with parecoxib at 2.9 Å resolution.

2zmn* 〈PDB〉 [レクチン]
Crystal Structure of basic winged bean lectin in complex with Gal-alpha- 1,6 Glc.

5zna 〈PDB〉 [Z-DNA（理論形）]
EVIDENCE FOR A NEW Z-TYPE LEFT-HANDED DNA HELIX: PROPERTIES OF Z(WC)-DNA.

2znl* 〈PDB，KEK資料〉 [A型インフルエンザウイルス / RNAポリメラーゼ / PA-PB1サブユニット]
Crystal structure of PA-PB1 complex form influenza virus RNA polymerase.

1zntのModel 1 〈PDB〉 [抗菌タンパク質 / キチン]
18 NMR structures of AcAMP2-Like Peptide with non Natural Fluoroaromatic Residue (AcAMP2F18Pff/Y20Pff) complex with N,N,N-triacetylchitotriose.

1zof* 〈PDB〉
Crystal structure of alkyl hydroperoxide-reductase (AhpC) from Helicobacter Pylori.

2zp1 〈PDB〉 [チロシル-tRNA合成酵素（TyrRS） / 3-ヨードチロシン]
Structual basis of iodo-tyrosine recognition by engineered archeal tyrosyl-tRNA synthetase.

1zsh* 〈PDB〉 [アレスチン / IP₆]
Crystal structure of bovine arrestin-2 in complex with inositol hexakisphosphate (IP6).

2zsh 〈PDB〉 [ジベレリン A₃]
Structural basis of gibberellin(GA3)-induced DELLA recognition by the gibberellin receptor.

2zu4 〈PDB〉 [SARSコロナウイルス / TG-0204998]
Complex structure of SARS-CoV 3CL protease with TG-0204998.

1zumのChain A・B・C・D 〈PDB〉 [ALDH2（ALDH2*2は不活性型）]
Human Mitochondrial Aldehyde Dehydrogenase Asian Variant, ALDH2*2, Apo Form.

2zuo 4.33MB 〈PDB，今月の分子，SPring-8資料〉 [ボルト（ヴォールト）タンパク質]
The structure of rat liver vault at 3.5Å resolution.

3zux 〈PDB，JST資料〉 [ナトリウム依存性胆汁酸輸送体（ASBT） / コレステロール調節タンパク質 / 膜貫通タンパク質 / タウロコール酸]　 タウロコール酸選択
CRYSTAL STRUCTURE OF A BACTERIAL HOMOLOGUE OF THE BILE ACID SODIUM SYMPORTER ASBT.

2zw3 〈PDB，JASRIプレスリリース〉 [ヒト由来ギャップ結合チャネル]
.

2zwh 〈PDB，Molecule of the Month〉 [F-アクチン（理研）]
Model for the F-actin structure.

2zxe* 〈PDB，SPring-8資料〉 [ナトリウム・カリウムポンプ]
Crystal structure of the sodium - potassium pump in the E2.2K+.Pi state.

2zxo 〈PDB〉 [RecJ（理研）]
Crystal structure of RecJ from Thermus thermophilus HB8.

1zxv 〈PDB〉 [炭疽菌致死因子（LF）]
X-Ray Crystal Structure of the Anthrax Lethal Factor Bound to a Small Molecule Inhibitor, BI-MFM3, 3-{5-[5-(4-Chloro-phenyl)-furan-2-ylmethylene]-4-oxo-2-thioxo-thiazolidin-3-yl}-propionic acid.

2zxz* 〈PDB〉 [レチノイン酸レセプターRXRα]
Crystal structure of the human RXR alpha ligand binding domain bound to a synthetic agonist compound and a coactivator peptide.

2zye* 〈PDB，日本原子力研究開発機構資料〉 [HIVプロテアーゼ阻害剤 / KNI-272]
Structure of HIV-1 Protease in Complex with Potent Inhibitor KNI-272 Determined by Neutron Crystallography.

2zzm* 〈PDB〉 [aTrm5-tRNA複合体（理研） / S-アデノシルメチオニン]
The complex structure of aTrm5 and tRNALeu.

2zzn* 〈PDB〉 [aTrm5-tRNA複合体（理研） / S-アデノシルメチオニン]
The complex structure of aTrm5 and tRNACys.

---

【自作参考データ例】　※※PDB収載のものではありません！
DNAの部分構造例

---

【参考情報】PDB収録データ以外の特殊データ

• インシリコサイエンス社に申込んでデータを入手し（詳細\1），PDBデータを詳細に見るためにを利用すれば本ページと同じような表現が可能になります。

\1 インシリコサイエンス社提供（北里大学薬学部梅山研究室により開発されたPDFAMSシリーズソフトウェアによって得られたデータ）
• Ogata, K. and Umeyama, H. (2000) J. Mol. Graph. Model 18, 258-272, 305-306.
• Iwadate, M., Ebisawa, K. and Umeyama, H. (2001) CBIJ 1, 136-148.